RNA–Protein interactions for RNA: ENST00000491827.1

U2SURP-213, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 3

Gene U2SURP, Length 824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-213ENST00000491827 TDP1Q9NUW8 608 aa4.86□□□□□ -1.63
U2SURP-213ENST00000491827 TBCCD1Q9NVR7 557 aa4.86□□□□□ -1.63
U2SURP-213ENST00000491827 LRIT1Q9P2V4 623 aa4.86□□□□□ -1.63
U2SURP-213ENST00000491827 POLHQ9Y253 713 aa4.86□□□□□ -1.63
U2SURP-213ENST00000491827 ANO9A1A5B4 782 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 FAM227AF5H4B4 570 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 UBXN7O94888 489 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 ARIH2O95376 493 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 MATN4O95460 622 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 ALDH2P05091 517 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 NBPF7P0C2Y1 421 aaPredicted RBP4.85□□□□□ -1.63
U2SURP-213ENST00000491827 ITGB6P18564 788 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 ABCG1P45844 678 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 SLC6A9P48067 706 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 FLT3LGP49771 235 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 FXR1P51114 621 aaKnown RBP eCLIP4.85□□□□□ -1.63
U2SURP-213ENST00000491827 CLRN1P58418 232 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 SIM1P81133 766 aaPredicted RBP4.85□□□□□ -1.63
U2SURP-213ENST00000491827 MRPS35P82673 323 aaKnown RBP4.85□□□□□ -1.63
U2SURP-213ENST00000491827 AGAP9Q5VTM2 703 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 METRNLQ641Q3 311 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 Q6ZNX1 250 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 OVCH2Q7RTZ1 564 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 C11orf96Q7Z7L8 435 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 RHOT2Q8IXI1 618 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 PPP1R35Q8TAP8 253 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 SLC35B2Q8TB61 432 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 SMG7Q92540 1137 aaKnown RBP4.85□□□□□ -1.63
U2SURP-213ENST00000491827 KAT5Q92993 513 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 RGMAQ96B86 450 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 CDK5RAP3Q96JB5 506 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 UHRF1Q96T88 793 aaPredicted RBP4.85□□□□□ -1.63
U2SURP-213ENST00000491827 CGRRF1Q99675 332 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 ZSWIM1Q9BR11 485 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 PCDHB1Q9Y5F3 818 aa4.85□□□□□ -1.63
U2SURP-213ENST00000491827 TPP1O14773 563 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 ADCY6O43306 1168 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 FTLP02792 175 aaPredicted RBP4.84□□□□□ -1.63
U2SURP-213ENST00000491827 SNRPA1P09661 255 aaKnown RBP4.84□□□□□ -1.63
U2SURP-213ENST00000491827 RHCEP18577 417 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 HTR1BP28222 390 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 SREBF1P36956 1147 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 AGFG1P52594 562 aaKnown RBP4.84□□□□□ -1.63
U2SURP-213ENST00000491827 RHDQ02161 417 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 GALEQ14376 348 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 RAB39AQ14964 217 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 SAFBQ15424 915 aaKnown RBP eCLIP4.84□□□□□ -1.63
U2SURP-213ENST00000491827 ANO6Q4KMQ2 910 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 COBLL1Q53SF7 1204 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 KIAA0319LQ8IZA0 1049 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 PQLC1Q8N2U9 271 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 TMEM132CQ8N3T6 1108 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 C3orf20Q8ND61 904 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 SVIPQ8NHG7 77 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 ACTRT2Q8TDY3 377 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 CLPTM1LQ96KA5 538 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 FAM167AQ96KS9 214 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 LANCL2Q9NS86 450 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 KLHL11Q9NVR0 708 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 CALCOCO1Q9P1Z2 691 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 L1RE1Q9UN81 338 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 SIK3Q9Y2K2 1263 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 STXBP5LQ9Y2K9 1186 aa4.84□□□□□ -1.63
U2SURP-213ENST00000491827 CXorf49A8MYA2 514 aaPredicted RBP4.83□□□□□ -1.64
U2SURP-213ENST00000491827 PJA2O43164 708 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 RBMXL2O75526 392 aaKnown RBP4.83□□□□□ -1.64
U2SURP-213ENST00000491827 ELANEP08246 267 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 MYBP10242 640 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 RARRES1P49788 294 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 MAP2K6P52564 334 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 HK3P52790 923 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 CACNB3P54284 484 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 RHBDL3P58872 404 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 FAM193AP78312 1265 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 SCAPQ12770 1279 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 PICALMQ13492 652 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 CCDC157Q569K6 752 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 AKNAD1Q5T1N1 836 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 DARS2Q6PI48 645 aaKnown RBP4.83□□□□□ -1.64
U2SURP-213ENST00000491827 NPNTQ6UXI9 565 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 CCDC149Q6ZUS6 474 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 DAAM2Q86T65 1068 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 RSPH3Q86UC2 560 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 SRRM1Q8IYB3 904 aaKnown RBP4.83□□□□□ -1.64
U2SURP-213ENST00000491827 SAMD3Q8N6K7 520 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 REPS2Q8NFH8 660 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 KLHDC4Q8TBB5 520 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 CCHCR1Q8TD31 782 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 CASKIN2Q8WXE0 1202 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 MRGPRX4Q96LA9 322 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 HEPHQ9BQS7 1158 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 SENP6Q9GZR1 1112 aaPredicted RBP4.83□□□□□ -1.64
U2SURP-213ENST00000491827 SEMA4GQ9NTN9 838 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 TMEM140Q9NV12 185 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 USP25Q9UHP3 1055 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 NR2E3Q9Y5X4 410 aa4.83□□□□□ -1.64
U2SURP-213ENST00000491827 MYBBP1AQ9BQG0 1328 aaKnown RBP4.82□□□□□ -1.64
U2SURP-213ENST00000491827 A0A088AWK7 358 aa4.82□□□□□ -1.64
U2SURP-213ENST00000491827 A0A1B0GTW7 788 aa4.82□□□□□ -1.64
U2SURP-213ENST00000491827 LRRC3CA6NJW4 275 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms