RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 SHKBP1Q8TBC3 707 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 SMARCD2Q92925 531 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 ZSWIM3Q96MP5 696 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 TMEM209Q96SK2 561 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 OSBPL6Q9BZF3 934 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 DNAJC25Q9H1X3 360 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 ASB7Q9H672 318 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 BRD9Q9H8M2 597 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 SPATA6Q9NWH7 488 aaPredicted RBP14.78□□□□□ -0.04
COL6A3-211ENST00000491233 AGO2Q9UKV8 859 aaKnown RBP14.78□□□□□ -0.04
COL6A3-211ENST00000491233 SRPRBQ9Y5M8 271 aaKnown RBP14.78□□□□□ -0.04
COL6A3-211ENST00000491233 STYXL1Q9Y6J8 313 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 FAM186AA6NE01 2351 aa14.78□□□□□ -0.04
COL6A3-211ENST00000491233 NCANO14594 1321 aa14.77□□□□□ -0.04
COL6A3-211ENST00000491233 ANO9A1A5B4 782 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 MYMKA6NI61 221 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 PIRO00625 290 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 EPHB3P54753 998 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.05
COL6A3-211ENST00000491233 CENPPQ6IPU0 288 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 ZC3H14Q6PJT7 736 aaKnown RBP14.77□□□□□ -0.05
COL6A3-211ENST00000491233 ZNF720Q7Z2F6 126 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 TMC8Q8IU68 726 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 EFCAB13Q8IY85 973 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 ATAD1Q8NBU5 361 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 OR10T2Q8NGX3 314 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 ZSCAN18Q8TBC5 510 aaPredicted RBP14.77□□□□□ -0.05
COL6A3-211ENST00000491233 KCNG4Q8TDN1 519 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 POMGNT1Q8WZA1 660 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 DNAJC19Q96DA6 116 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 USP28Q96RU2 1077 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 SLITRK6Q9H5Y7 841 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 MRPL44Q9H9J2 332 aaKnown RBP14.77□□□□□ -0.05
COL6A3-211ENST00000491233 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 TBC1D7Q9P0N9 293 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 SLC27A5Q9Y2P5 690 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 C2CD2Q9Y426 696 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 OBSL1O75147 1896 aa14.77□□□□□ -0.05
COL6A3-211ENST00000491233 A0A1W2PRU2 124 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 SOAT2O75908 522 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 LMNAP02545 664 aaKnown RBP14.76□□□□□ -0.05
COL6A3-211ENST00000491233 GAP43P17677 238 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 PAX3P23760 479 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 GDI1P31150 447 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 VIPR2P41587 438 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 MAGEA9P43362 315 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 ALDH1A3P47895 512 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 ARMCX5Q6P1M9 558 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 CRELD2Q6UXH1 353 aaPredicted RBP14.76□□□□□ -0.05
COL6A3-211ENST00000491233 SV2BQ7L1I2 683 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 MAML2Q8IZL2 1156 aaPredicted RBP14.76□□□□□ -0.05
COL6A3-211ENST00000491233 DEPDC1BQ8WUY9 529 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 PYM1Q9BRP8 204 aaKnown RBP14.76□□□□□ -0.05
COL6A3-211ENST00000491233 TRMT61BQ9BVS5 477 aaKnown RBP14.76□□□□□ -0.05
COL6A3-211ENST00000491233 STRA6Q9BX79 667 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 LRRC3Q9BY71 257 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 SEMA4AQ9H3S1 761 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 DPP3Q9NY33 737 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 SEL1LQ9UBV2 794 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 EXOC7Q9UPT5 735 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 MTMR6Q9Y217 621 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 DENND4CQ5VZ89 1909 aa14.76□□□□□ -0.05
COL6A3-211ENST00000491233 KIF26AQ9ULI4 1882 aaPredicted RBP14.76□□□□□ -0.05
COL6A3-211ENST00000491233 MYO15AQ9UKN7 3530 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 SHISA7A6NL88 538 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 LAMTOR5O43504 91 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 GCNT3O95395 438 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 CYP11A1P05108 521 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 IDEP14735 1019 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 PSMC3P17980 439 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 ADSSP30520 456 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 STAT6P42226 847 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 TAF6P49848 677 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 KCNA1Q09470 495 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 L1TD1Q5T7N2 865 aaKnown RBP14.75□□□□□ -0.05
COL6A3-211ENST00000491233 ZNF852Q6ZMS4 543 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 CCDC73Q6ZRK6 1079 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 IRF7Q92985 503 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 INTS4Q96HW7 963 aaKnown RBP14.75□□□□□ -0.05
COL6A3-211ENST00000491233 NELL2Q99435 816 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 TRPV4Q9HBA0 871 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 ZNF334Q9HCZ1 680 aaPredicted RBP14.75□□□□□ -0.05
COL6A3-211ENST00000491233 DSEQ9UL01 958 aa14.75□□□□□ -0.05
COL6A3-211ENST00000491233 MRPS17Q9Y2R5 130 aaKnown RBP14.75□□□□□ -0.05
COL6A3-211ENST00000491233 A0A087X0B3 334 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 HEPACAM2A8MVW5 462 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 CYB561D2O14569 222 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 NCAM2O15394 837 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 IL18RAPO95256 599 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 CDR1P51861 262 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 CASP5P51878 434 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 WNT7BP56706 349 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 POU5F1Q01860 360 aaKnown RBP14.74□□□□□ -0.05
COL6A3-211ENST00000491233 POSTNQ15063 836 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 SV2CQ496J9 727 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 SLC39A12Q504Y0 691 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 STXBP5Q5T5C0 1151 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 METTL23Q86XA0 190 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 BRSK2Q8IWQ3 736 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 FAM200AQ8TCP9 573 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms