RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 IL18RAPO95256 599 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 CYP11A1P05108 521 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 ODC1P11926 461 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 PDIA4P13667 645 aaKnown RBP19.47■□□□□ 0.71
HMGN1-219ENST00000491183 GARTP22102 1010 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 DUSP4Q13115 394 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 MYBPC2Q14324 1141 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 SCARA3Q6AZY7 606 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 CENPPQ6IPU0 288 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 ZNF512Q96ME7 567 aaPredicted RBP19.47■□□□□ 0.71
HMGN1-219ENST00000491183 RTP3Q9BQQ7 232 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 TRIM9Q9C026 710 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 CUEDC2Q9H467 287 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 TBC1D17Q9HA65 648 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 YIPF1Q9Y548 306 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 GTF3C3Q9Y5Q9 886 aa19.47■□□□□ 0.71
HMGN1-219ENST00000491183 STK25O00506 426 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 CYB561D2O14569 222 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 ZNF197O14709 1029 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 MICAL2O94851 1124 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 LDHAP00338 332 aaKnown RBP19.46■□□□□ 0.71
HMGN1-219ENST00000491183 HOXD13P35453 343 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 TAF6P49848 677 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 EPHA5P54756 1037 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 CYP4A22Q5TCH4 519 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 TANGO2Q6ICL3 276 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 IQCEQ6IPM2 695 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 PDZD4Q76G19 769 aaPredicted RBP19.46■□□□□ 0.71
HMGN1-219ENST00000491183 NT5DC4Q86YG4 428 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 BRSK2Q8IWQ3 736 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 ELMOD1Q8N336 334 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 IQUBQ8NA54 791 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 ATAD1Q8NBU5 361 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 OR10T2Q8NGX3 314 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 ATOH1Q92858 354 aaPredicted RBP19.46■□□□□ 0.71
HMGN1-219ENST00000491183 LRRC3Q9BY71 257 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 LRRC27Q9C0I9 530 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 IRF2BPLQ9H1B7 796 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 DNAJC25Q9H1X3 360 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 PCIF1Q9H4Z3 704 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 TMEM206Q9H813 350 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 ARHGEF3Q9NR81 526 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 PCDHA7Q9UN72 937 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 SLC27A5Q9Y2P5 690 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 TCHHQ07283 1943 aa19.46■□□□□ 0.71
HMGN1-219ENST00000491183 MTMR11A4FU01 709 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 EXTL3O43909 919 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 ECI2O75521 394 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 GJA1P17302 382 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 FCARP24071 287 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 PHLDB3Q6NSJ2 640 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 CNNM4Q6P4Q7 775 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 CCDC105Q8IYK2 499 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 TTC9BQ8N6N2 239 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 FAM84AQ96KN4 292 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 ZSWIM3Q96MP5 696 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 PYM1Q9BRP8 204 aaKnown RBP19.45■□□□□ 0.7
HMGN1-219ENST00000491183 RBAKQ9NYW8 714 aaPredicted RBP19.45■□□□□ 0.7
HMGN1-219ENST00000491183 COL4A3Q01955 1670 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 PIEZO1Q92508 2521 aa19.45■□□□□ 0.7
HMGN1-219ENST00000491183 CACNA1HO95180 2353 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 KPNA7A9QM74 516 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 POLR2DO15514 142 aaKnown RBP19.44■□□□□ 0.7
HMGN1-219ENST00000491183 MYL4P12829 197 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 STARD6P59095 220 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 TFAMQ00059 246 aaKnown RBP19.44■□□□□ 0.7
HMGN1-219ENST00000491183 AMPD3Q01432 767 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 DNM1Q05193 864 aaKnown RBP19.44■□□□□ 0.7
HMGN1-219ENST00000491183 SNW1Q13573 536 aaKnown RBP19.44■□□□□ 0.7
HMGN1-219ENST00000491183 FAM78AQ5JUQ0 283 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 WSCD1Q658N2 575 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 ARMCX5Q6P1M9 558 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 C1orf127Q8N9H9 656 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 DTWD2Q8NBA8 298 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 CXorf38Q8TB03 319 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 KCNG4Q8TDN1 519 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 C7orf25Q9BPX7 421 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 ZCWPW1Q9H0M4 648 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 DSEQ9UL01 958 aa19.44■□□□□ 0.7
HMGN1-219ENST00000491183 TULP1O00294 542 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-219ENST00000491183 SOAT2O75908 522 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 CASP1P29466 404 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 CDR1P51861 262 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 ASIC1P78348 528 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 SLC44A4Q53GD3 710 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 ATL3Q6DD88 541 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 EPM2AIP1Q7L775 607 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-219ENST00000491183 LRRTM3Q86VH5 581 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 TMC8Q8IU68 726 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 GPD1LQ8N335 351 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 LEMD2Q8NC56 503 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 ZNF507Q8TCN5 953 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 ELSPBP1Q96BH3 223 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 PDE11AQ9HCR9 933 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 DLGAP2Q9P1A6 1054 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 RCOR1Q9UKL0 485 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 AGAP1Q9UPQ3 857 aa19.43■□□□□ 0.7
HMGN1-219ENST00000491183 ITGB3P05106 788 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 DCNP07585 359 aaKnown RBP19.42■□□□□ 0.7
HMGN1-219ENST00000491183 POLR2BP30876 1174 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms