RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ADPGKQ9BRR6 497 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 RNF39Q9H2S5 420 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 FAM153AQ9UHL3 310 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 TRIM49P0CI25 452 aa24.33■■□□□ 1.49
USF3-203ENST00000491165 TRIM49CP0CI26 452 aa24.33■■□□□ 1.49
USF3-203ENST00000491165 PLEKHG4Q58EX7 1191 aa24.33■■□□□ 1.49
USF3-203ENST00000491165 IQCKQ8N0W5 287 aa24.33■■□□□ 1.49
USF3-203ENST00000491165 SMG8Q8ND04 991 aaKnown RBP24.33■■□□□ 1.49
USF3-203ENST00000491165 WHAMMQ8TF30 809 aa24.33■■□□□ 1.49
USF3-203ENST00000491165 CASKIN2Q8WXE0 1202 aa24.33■■□□□ 1.49
USF3-203ENST00000491165 TNRC18O15417 2968 aaPredicted RBP24.33■■□□□ 1.49
USF3-203ENST00000491165 KCNK3O14649 394 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 STAG3L1P0CL83 205 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 CXCL8P10145 99 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 ANXA13P27216 316 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 RNASE9P60153 205 aaKnown RBP24.32■■□□□ 1.48
USF3-203ENST00000491165 CYP24A1Q07973 514 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 DCAF17Q5H9S7 520 aaPredicted RBP24.32■■□□□ 1.48
USF3-203ENST00000491165 DEFB128Q7Z7B8 93 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 SLC35C1Q96A29 364 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 MFSD14AQ96MC6 490 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 METTL14Q9HCE5 456 aaKnown RBP24.32■■□□□ 1.48
USF3-203ENST00000491165 SNTG2Q9NY99 539 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 NAGPAQ9UK23 515 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 TMEM59LQ9UK28 342 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 PTPRJQ12913 1337 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 KIAA0355O15063 1070 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 KIF4AO95239 1232 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 PRKCIP41743 596 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 BFSP1Q12934 665 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 CCDC127Q96BQ5 260 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 PBKQ96KB5 322 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 ADAM2Q99965 735 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 FAM107BQ9H098 131 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 RBAKQ9NYW8 714 aaPredicted RBP24.32■■□□□ 1.48
USF3-203ENST00000491165 IPPQ9Y573 584 aa24.32■■□□□ 1.48
USF3-203ENST00000491165 ATP8B3O60423 1300 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 ZNF233A6NK53 670 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 TULP1O00294 542 aaPredicted RBP24.31■■□□□ 1.48
USF3-203ENST00000491165 RAD51CO43502 376 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 LDHAP00338 332 aaKnown RBP24.31■■□□□ 1.48
USF3-203ENST00000491165 TIMP1P01033 207 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 NOP2P46087 812 aaKnown RBP24.31■■□□□ 1.48
USF3-203ENST00000491165 ALKBH5Q6P6C2 394 aaKnown RBP24.31■■□□□ 1.48
USF3-203ENST00000491165 BCAS4Q8TDM0 211 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 PARD3BQ8TEW8 1205 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 CHST12Q9NRB3 414 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 TOPORSQ9NS56 1045 aaPredicted RBP24.31■■□□□ 1.48
USF3-203ENST00000491165 FAM105AQ9NUU6 356 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 RNF19AQ9NV58 838 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 FBXL5Q9UKA1 691 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 KIAA0391O15091 583 aaKnown RBP24.31■■□□□ 1.48
USF3-203ENST00000491165 KRT14P02533 472 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 AKAP5P24588 427 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 CCT5P48643 541 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 GUCY2FP51841 1108 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 SKIDA1Q1XH10 827 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 DCAF4L1Q3SXM0 396 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 LMBRD2Q68DH5 695 aaPredicted RBP24.31■■□□□ 1.48
USF3-203ENST00000491165 TMEM130Q8N3G9 435 aa24.31■■□□□ 1.48
USF3-203ENST00000491165 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.31■■□□□ 1.48
USF3-203ENST00000491165 TRIM6Q9C030 488 aaPredicted RBP24.31■■□□□ 1.48
USF3-203ENST00000491165 MAPK13O15264 365 aa24.3■■□□□ 1.48
USF3-203ENST00000491165 CXCL10P02778 98 aa24.3■■□□□ 1.48
USF3-203ENST00000491165 TCERG1LQ5VWI1 586 aa24.3■■□□□ 1.48
USF3-203ENST00000491165 VPS36Q86VN1 386 aa24.3■■□□□ 1.48
USF3-203ENST00000491165 CD302Q8IX05 232 aa24.3■■□□□ 1.48
USF3-203ENST00000491165 KLHL7Q8IXQ5 586 aa24.3■■□□□ 1.48
USF3-203ENST00000491165 LRRC57Q8N9N7 239 aa24.3■■□□□ 1.48
USF3-203ENST00000491165 APOL6Q9BWW8 343 aa24.3■■□□□ 1.48
USF3-203ENST00000491165 PCDHB2Q9Y5E7 798 aa24.3■■□□□ 1.48
USF3-203ENST00000491165 MICAL3Q7RTP6 2002 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 CSF2RAP15509 400 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 SLC10A6Q3KNW5 377 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 INTS8Q75QN2 995 aaKnown RBP24.29■■□□□ 1.48
USF3-203ENST00000491165 BRSK2Q8IWQ3 736 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 KIAA1586Q9HCI6 787 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 RALGAPA2Q2PPJ7 1873 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 LTBP2Q14767 1821 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 EBAG9O00559 213 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 DLATP10515 647 aaKnown RBP24.29■■□□□ 1.48
USF3-203ENST00000491165 RAG1P15918 1043 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 ATF7P17544 494 aaPredicted RBP24.29■■□□□ 1.48
USF3-203ENST00000491165 GRM5P41594 1212 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 VAMP7P51809 220 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 PPP3CAQ08209 521 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 SCARA3Q6AZY7 606 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 EFCAB13Q8IY85 973 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 ACTRT1Q8TDG2 376 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 LPPQ93052 612 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 GCNT4Q9P109 453 aa24.29■■□□□ 1.48
USF3-203ENST00000491165 IBSPP21815 317 aaPredicted RBP24.28■■□□□ 1.48
USF3-203ENST00000491165 JAM2P57087 298 aa24.28■■□□□ 1.48
USF3-203ENST00000491165 MCCD1P59942 119 aaPredicted RBP24.28■■□□□ 1.48
USF3-203ENST00000491165 C7orf61Q8IZ16 206 aa24.28■■□□□ 1.48
USF3-203ENST00000491165 EIF1ADQ8N9N8 165 aaKnown RBP24.28■■□□□ 1.48
USF3-203ENST00000491165 PPM1EQ8WY54 764 aa24.28■■□□□ 1.48
USF3-203ENST00000491165 PIK3R5Q8WYR1 880 aa24.28■■□□□ 1.48
USF3-203ENST00000491165 FAM212AQ96EL1 285 aa24.28■■□□□ 1.48
USF3-203ENST00000491165 SIX2Q9NPC8 291 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms