RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MCM2P49736 904 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 GALK1P51570 392 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 RCAN1P53805 252 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 RUNX3Q13761 415 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 MOXD1Q6UVY6 613 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 ARMCX6Q7L4S7 300 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 DHX32Q7L7V1 743 aaKnown RBP15.04■□□□□ -0
EXOSC3-207ENST00000490516 EZH1Q92800 747 aaPredicted RBP15.04■□□□□ -0
EXOSC3-207ENST00000490516 FAM83CQ9BQN1 747 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 CRISPLD1Q9H336 500 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 ATXN3LQ9H3M9 355 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 EBF3Q9H4W6 596 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 KCNMB3Q9NPA1 279 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 GPRC5CQ9NQ84 441 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 THG1LQ9NWX6 298 aaKnown RBP15.04■□□□□ -0
EXOSC3-207ENST00000490516 TPCN1Q9ULQ1 816 aa15.04■□□□□ -0
EXOSC3-207ENST00000490516 ATXN2Q99700 1313 aaKnown RBP15.03■□□□□ -0
EXOSC3-207ENST00000490516 CCDC196A0A1B0GTZ2 297 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 SMIM28A0A1B0GU29 152 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 DGAT1O75907 488 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 LIG1P18858 919 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 AKAP17AQ02040 695 aaKnown RBP15.03■□□□□ -0
EXOSC3-207ENST00000490516 PRPF4BQ13523 1007 aaKnown RBP15.03■□□□□ -0
EXOSC3-207ENST00000490516 FAM187BQ17R55 369 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 INF2Q27J81 1249 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 LARP1BQ659C4 914 aaKnown RBP15.03■□□□□ -0
EXOSC3-207ENST00000490516 ZNF280DQ6N043 979 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 CCNI2Q6ZMN8 369 aaPredicted RBP15.03■□□□□ -0
EXOSC3-207ENST00000490516 MAEAQ7L5Y9 396 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 C11orf74Q86VG3 221 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 PNPLA1Q8N8W4 532 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 DAGLBQ8NCG7 672 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 TSTD1Q8NFU3 115 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 FAM20AQ96MK3 541 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 PGLYRP2Q96PD5 576 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 ADPGKQ9BRR6 497 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 SLC26A6Q9BXS9 759 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 C22orf23Q9BZE7 217 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 MAFFQ9ULX9 164 aa15.03■□□□□ -0
EXOSC3-207ENST00000490516 A0A087WWV3 80 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 SLITRK3O94933 977 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 OR4Q2P0C623 313 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 DRD1P21728 446 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 GABRR2P28476 465 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 EPHB3P54753 998 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 CYP4F8P98187 520 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 PSMD2Q13200 908 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 ADCK5Q3MIX3 580 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 CDCA2Q69YH5 1023 aaPredicted RBP15.02■□□□□ -0
EXOSC3-207ENST00000490516 HDDC3Q8N4P3 179 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 HAS1Q92839 578 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 P2RY13Q9BPV8 354 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 GTPBP2Q9BX10 602 aaKnown RBP15.02■□□□□ -0
EXOSC3-207ENST00000490516 PCDHA4Q9UN74 947 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 NUB1Q9Y5A7 615 aa15.02■□□□□ -0
EXOSC3-207ENST00000490516 CITO14578 2027 aa15.02□□□□□ -0.01
EXOSC3-207ENST00000490516 PCDH15Q96QU1 1955 aa15.02□□□□□ -0.01
EXOSC3-207ENST00000490516 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 M0R2N6 131 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 USO1O60763 962 aaKnown RBP15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 ARSAP15289 507 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 PTGER3P43115 390 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 DUSP4Q13115 394 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 NTRK3Q16288 839 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 FBXO43Q4G163 708 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 ARHGAP15Q53QZ3 475 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 ANO7Q6IWH7 933 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 DNAJB7Q7Z6W7 309 aaPredicted RBP15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 SYT12Q8IV01 421 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 ZBTB8OSQ8IWT0 167 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 TMEFF1Q8IYR6 380 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 BEST2Q8NFU1 509 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 SLC39A7Q92504 469 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 ACDQ96AP0 544 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 CAMK1GQ96NX5 476 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 SLC27A5Q9Y2P5 690 aa15.01□□□□□ -0.01
EXOSC3-207ENST00000490516 PLXND1Q9Y4D7 1925 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 SOAT2O75908 522 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 CFIP05156 583 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 CD59P13987 128 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 WEE1P30291 646 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 ALDH1A3P47895 512 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 RARRES1P49788 294 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 PLD1Q13393 1074 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 SLC23A3Q6PIS1 610 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 RASSF3Q86WH2 238 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 BLIDQ8IZY5 108 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 FRMD1Q8N878 549 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 MDGA1Q8NFP4 955 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 OR2I1PQ8NGU4 316 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 RLN3Q8WXF3 142 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 ADAMTS14Q8WXS8 1223 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 DDX12PQ92771 950 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 SUSD3Q96L08 255 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 CCDC43Q96MW1 224 aaKnown RBP15□□□□□ -0.01
EXOSC3-207ENST00000490516 UBL7Q96S82 380 aaPredicted RBP15□□□□□ -0.01
EXOSC3-207ENST00000490516 RNF26Q9BY78 433 aaPredicted RBP15□□□□□ -0.01
EXOSC3-207ENST00000490516 TASP1Q9H6P5 420 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 SH3GLB2Q9NR46 395 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 ANKEF1Q9NU02 776 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms