RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 IL25Q9H293 177 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 DISC1Q9NRI5 854 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 MTRRQ9UBK8 725 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 DKK4Q9UBT3 224 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 GIT1Q9Y2X7 761 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 TAF6LQ9Y6J9 622 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 ZMYM2Q9UBW7 1377 aa7.94□□□□□ -1.14
PDLIM1-203ENST00000490391 UTP20O75691 2785 aaKnown RBP7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 A0A087WV48 116 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 ATXN7O15265 892 aaPredicted RBP7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF76P36508 570 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 DNM2P50570 870 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 KPNA1P52294 538 aaPredicted RBP7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 SPIRE1Q08AE8 756 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 GRIK3Q13003 919 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 AP3B2Q13367 1082 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 KARSQ15046 597 aaKnown RBP7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF423Q2M1K9 1284 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 MTERF2Q49AM1 385 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 CWC27Q6UX04 472 aaKnown RBP7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 LYSMD3Q7Z3D4 306 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 HEATR3Q7Z4Q2 680 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF605Q86T29 641 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 CEP57Q86XR8 500 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 ZSCAN18Q8TBC5 510 aaPredicted RBP7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 CHFRQ96EP1 664 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 LRRC3BQ96PB8 259 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 HHIPQ96QV1 700 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 NXF3Q9H4D5 531 aaKnown RBP7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 SNTG2Q9NY99 539 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 GTSE1Q9NYZ3 720 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 EVLQ9UI08 416 aaPredicted RBP7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 SAMM50Q9Y512 469 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 COL4A3BPQ9Y5P4 624 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 CDY1Q9Y6F8 540 aa7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 USP9YO00507 2555 aaPredicted RBP7.93□□□□□ -1.14
PDLIM1-203ENST00000490391 PTPRDP23468 1912 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 ERICH2A1L162 156 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 J3QKU1 62 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF197O14709 1029 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 ARHGAP6O43182 974 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 TSPAN1O60635 241 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 ABLIM3O94929 683 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 CYP21A2P08686 494 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 RXRAP19793 462 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 FGFR3P22607 806 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 IGFBP6P24592 240 aaPredicted RBP7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 GNAQP50148 359 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 EPHA5P54756 1037 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 SETQ01105 290 aaPredicted RBP7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 SRSF1Q07955 248 aaKnown RBP eCLIP7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 NAB2Q15742 525 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 DBN1Q16643 649 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 TMEM196Q5HYL7 178 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 PDXDC1Q6P996 788 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 PDZD4Q76G19 769 aaPredicted RBP7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 CYP2U1Q7Z449 544 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 SRGAP1Q7Z6B7 1085 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 TTC8Q8TAM2 541 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 ADAMTS14Q8WXS8 1223 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 E2F7Q96AV8 911 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 CCDC51Q96ER9 411 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 ZFYVE19Q96K21 471 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 KCTD15Q96SI1 283 aaPredicted RBP7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 EBF1Q9UH73 591 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 SLC8A2Q9UPR5 921 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 KIAA1549LQ6ZVL6 1849 aa7.92□□□□□ -1.14
PDLIM1-203ENST00000490391 ADAMTS9Q9P2N4 1935 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 PCDH15Q96QU1 1955 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 KNL1Q8NG31 2342 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 TLN1Q9Y490 2541 aaKnown RBP7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 CENPEQ02224 2701 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 CASTOR2A6NHX0 329 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 PTGESO14684 152 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 ADAMTS3O15072 1205 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 LRG1P02750 347 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 GJA1P17302 382 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 BCKDHBP21953 392 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 AKAP5P24588 427 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 MAPK8P45983 427 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 NAPAP54920 295 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 ROR1Q01973 937 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 LMAN2Q12907 356 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 TRDNQ13061 729 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 TUSC3Q13454 348 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 SART3Q15020 963 aaKnown RBP7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 AMHR2Q16671 573 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 TRIM61Q5EBN2 209 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 XKR3Q5GH77 459 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 FSTL4Q6MZW2 842 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 NOTUMQ6P988 496 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 TMTC3Q6ZXV5 915 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 ANO5Q75V66 913 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 MB21D2Q8IYB1 491 aaPredicted RBP7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 TCEAL8Q8IYN2 117 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 CCDC82Q8N4S0 544 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 DAGLBQ8NCG7 672 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 LSM14AQ8ND56 463 aaKnown RBP7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 ZNF461Q8TAF7 563 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms