RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PDCD4Q53EL6 469 aaKnown RBP4.87□□□□□ -1.63
CD46-216ENST00000490278 USP39Q53GS9 565 aaKnown RBP4.87□□□□□ -1.63
CD46-216ENST00000490278 SYCP2LQ5T4T6 812 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 ZNF783Q6ZMS7 281 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 C1orf210Q8IVY1 113 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 OR6B3Q8NGW1 331 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 PHKBQ93100 1093 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 VKORC1Q9BQB6 163 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 CNPPD1Q9BV87 410 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 NAA15Q9BXJ9 866 aaKnown RBP4.87□□□□□ -1.63
CD46-216ENST00000490278 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 DPH1Q9BZG8 443 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 ZNF287Q9HBT7 754 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 CHST12Q9NRB3 414 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 PARPBPQ9NWS1 579 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 SRRDQ9UH36 339 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 OGDHLQ9ULD0 1010 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 AGAP1Q9UPQ3 857 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 CDYLQ9Y232 598 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 TSC22D4Q9Y3Q8 395 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 PLEKHM1Q9Y4G2 1056 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 AHRRA9YTQ3 701 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 M0QYG6 137 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 BTN3A1O00481 513 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 TBC1D4O60343 1298 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 FAM20BO75063 409 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 DNAJB5O75953 348 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 UNC5CO95185 931 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 ABHD16AO95870 558 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 FGFR4P22455 802 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 PIGFQ07326 219 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 ZNF844Q08AG5 666 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 TCF15Q12870 199 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 CDSNQ15517 529 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 SPATS1Q496A3 300 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 SPDYAQ5MJ70 313 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 FOXR2Q6PJQ5 311 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 MAPKAPK5Q8IW41 473 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 CFAP52Q8N1V2 620 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 IL17DQ8TAD2 202 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 EXTL1Q92935 676 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 MED15Q96RN5 788 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 ZSWIM1Q9BR11 485 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 SLC46A2Q9BY10 475 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 TEX101Q9BY14 249 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 ZNF703Q9H7S9 590 aaPredicted RBP4.86□□□□□ -1.63
CD46-216ENST00000490278 CPNE7Q9UBL6 633 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 FPGT-TNNI3KV9GXZ4 949 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 AATKQ6ZMQ8 1374 aa4.86□□□□□ -1.63
CD46-216ENST00000490278 GAGE12BA1L429 117 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 GAGE12HA6NDE8 117 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 RHPN2P1A8MT19 583 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 FOXN3O00409 490 aaPredicted RBP4.85□□□□□ -1.63
CD46-216ENST00000490278 RNASET2O00584 256 aaKnown RBP4.85□□□□□ -1.63
CD46-216ENST00000490278 PLSCR1O15162 318 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 ERN1O75460 977 aaKnown RBP4.85□□□□□ -1.63
CD46-216ENST00000490278 KIF20AO95235 890 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 GPANK1O95872 356 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 GRPP07492 148 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 MYL3P08590 195 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 IFIT2P09913 472 aaKnown RBP4.85□□□□□ -1.63
CD46-216ENST00000490278 PIM1P11309 404 aaPredicted RBP4.85□□□□□ -1.63
CD46-216ENST00000490278 POU6F2P78424 691 aaPredicted RBP4.85□□□□□ -1.63
CD46-216ENST00000490278 HSD11B2P80365 405 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 OCA2Q04671 838 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 SLC13A2Q13183 592 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 IFIT5Q13325 482 aaKnown RBP4.85□□□□□ -1.63
CD46-216ENST00000490278 AMOTQ4VCS5 1084 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 SLC44A4Q53GD3 710 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 FAM160B1Q5W0V3 765 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 LMBRD2Q68DH5 695 aaPredicted RBP4.85□□□□□ -1.63
CD46-216ENST00000490278 SMOQ99835 787 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 SACM1LQ9NTJ5 587 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 STK32BQ9NY57 414 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 RNF181Q9P0P0 153 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 CEP72Q9P209 647 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 HSFX1Q9UBD0 423 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 AFF4Q9UHB7 1163 aaKnown RBP4.85□□□□□ -1.63
CD46-216ENST00000490278 PHTF1Q9UMS5 762 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 PAXBP1Q9Y5B6 917 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 SNX13Q9Y5W8 968 aa4.85□□□□□ -1.63
CD46-216ENST00000490278 CCDC195A0A1B0GUA6 201 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 CCDC78A2IDD5 438 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 MYO1CO00159 1063 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 POLRMTO00411 1230 aaKnown RBP4.84□□□□□ -1.63
CD46-216ENST00000490278 NCR1O76036 304 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 CFIP05156 583 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 HLA-DOAP06340 250 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 ELANEP08246 267 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 ZKSCAN1P17029 563 aaPredicted RBP4.84□□□□□ -1.63
CD46-216ENST00000490278 FDXRP22570 491 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 PIK3CBP42338 1070 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 AK2P54819 239 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 FAM189BP81408 668 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 CTBP1Q13363 440 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 RAB32Q13637 225 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 BRD3Q15059 726 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 NRN1LQ496H8 165 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 TAPT1Q6NXT6 567 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms