RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 TACC1O75410 805 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 NOL4O94818 638 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 CYP11A1P05108 521 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 ITGB1P05556 798 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 RB1P06400 928 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 CA3P07451 260 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 TYMPP19971 482 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 BMPR1AP36894 532 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 KLK7P49862 253 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 POLR2FP61218 127 aaKnown RBP14.87□□□□□ -0.03
C9orf3-221ENST00000489562 SMAD3P84022 425 aaKnown RBP14.87□□□□□ -0.03
C9orf3-221ENST00000489562 PLCB3Q01970 1234 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 KRT17Q04695 432 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 FUT10Q6P4F1 479 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-221ENST00000489562 CACNA2D4Q7Z3S7 1137 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 LIMS2Q7Z4I7 341 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 PPFIBP1Q86W92 1011 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 METTL23Q86XA0 190 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 ARHGEF19Q8IW93 802 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 HASPINQ8TF76 798 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 TGS1Q96RS0 853 aaKnown RBP14.87□□□□□ -0.03
C9orf3-221ENST00000489562 PBX4Q9BYU1 374 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 DNAJC12Q9UKB3 198 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 MYO6Q9UM54 1294 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 FHOD1Q9Y613 1164 aa14.87□□□□□ -0.03
C9orf3-221ENST00000489562 GOLGA6L6A8MZA4 724 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 NT5C1B-RDH14C9J2C7 533 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 CTNNB1P35222 781 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 PBX3P40426 434 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 BRCC3P46736 316 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 INCA1Q0VD86 236 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 SOWAHAQ2M3V2 549 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 IQCEQ6IPM2 695 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 SCARA5Q6ZMJ2 495 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 RRAGAQ7L523 313 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 TMC6Q7Z403 805 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 DDX53Q86TM3 631 aaKnown RBP14.86□□□□□ -0.03
C9orf3-221ENST00000489562 ZNF397Q8NF99 534 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-221ENST00000489562 SPAG5Q96R06 1193 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 C11orf84Q9BUA3 381 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-221ENST00000489562 NAA15Q9BXJ9 866 aaKnown RBP14.86□□□□□ -0.03
C9orf3-221ENST00000489562 STK33Q9BYT3 514 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 TTYH3Q9C0H2 523 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 NUCKS1Q9H1E3 243 aaKnown RBP14.86□□□□□ -0.03
C9orf3-221ENST00000489562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.86□□□□□ -0.03
C9orf3-221ENST00000489562 POLIQ9UNA4 740 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 LZTS1Q9Y250 596 aa14.86□□□□□ -0.03
C9orf3-221ENST00000489562 F8W810 466 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 EPHB6O15197 1021 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 FGF18O76093 207 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 EFEMP2O95967 443 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 SOD2P04179 222 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 MYOGP15173 224 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 FGFR3P22607 806 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 WARSP23381 471 aaKnown RBP14.85□□□□□ -0.03
C9orf3-221ENST00000489562 LHX1P48742 406 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 ERVK-21P61565 698 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 APBA1Q02410 837 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 TAP1Q03518 808 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 UBE3AQ05086 875 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 RAPGEF1Q13905 1077 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 PTPN21Q16825 1174 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 USP41Q3LFD5 358 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 LRIT3Q3SXY7 679 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 PRPF38BQ5VTL8 546 aaKnown RBP14.85□□□□□ -0.03
C9orf3-221ENST00000489562 PDXDC1Q6P996 788 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 UNC93AQ86WB7 457 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 TMEM173Q86WV6 379 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-221ENST00000489562 DRC7Q8IY82 874 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 GPR65Q8IYL9 337 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 RNF168Q8IYW5 571 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-221ENST00000489562 ADGRF2Q8IZF7 708 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 PDCL2Q8N4E4 241 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 BCL7CQ8WUZ0 217 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-221ENST00000489562 SHC3Q92529 594 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 KREMEN1Q96MU8 473 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 HERC2P3Q9BVR0 1158 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 OXCT2Q9BYC2 517 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-221ENST00000489562 GPR62Q9BZJ7 368 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 SMYD3Q9H7B4 428 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 SLC28A3Q9HAS3 691 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 IMPACTQ9P2X3 320 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 PUF60Q9UHX1 559 aaKnown RBP14.85□□□□□ -0.03
C9orf3-221ENST00000489562 CAPN11Q9UMQ6 739 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 L1RE1Q9UN81 338 aa14.85□□□□□ -0.03
C9orf3-221ENST00000489562 YBX2Q9Y2T7 364 aaKnown RBP14.85□□□□□ -0.03
C9orf3-221ENST00000489562 LUC7L2Q9Y383 392 aaKnown RBP14.85□□□□□ -0.03
C9orf3-221ENST00000489562 GYPCP04921 128 aa14.84□□□□□ -0.03
C9orf3-221ENST00000489562 WEE2P0C1S8 567 aa14.84□□□□□ -0.03
C9orf3-221ENST00000489562 IGFBP6P24592 240 aaPredicted RBP14.84□□□□□ -0.03
C9orf3-221ENST00000489562 JAM2P57087 298 aa14.84□□□□□ -0.03
C9orf3-221ENST00000489562 ZBED6P86452 979 aa14.84□□□□□ -0.03
C9orf3-221ENST00000489562 BMS1Q14692 1282 aaKnown RBP14.84□□□□□ -0.03
C9orf3-221ENST00000489562 DRAP1Q14919 205 aaPredicted RBP14.84□□□□□ -0.03
C9orf3-221ENST00000489562 ARHGAP44Q17R89 818 aa14.84□□□□□ -0.03
C9orf3-221ENST00000489562 FAM171A1Q5VUB5 890 aa14.84□□□□□ -0.03
C9orf3-221ENST00000489562 PPP2R2DQ66LE6 453 aa14.84□□□□□ -0.03
C9orf3-221ENST00000489562 GJB7Q6PEY0 223 aa14.84□□□□□ -0.03
C9orf3-221ENST00000489562 CNGA4Q8IV77 575 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms