RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 INTS13Q9NVM9 706 aa14.43□□□□□ -0.1
CCL28-202ENST00000489442 RMND1Q9NWS8 449 aa14.43□□□□□ -0.1
CCL28-202ENST00000489442 MAPK8IP1Q9UQF2 711 aa14.43□□□□□ -0.1
CCL28-202ENST00000489442 USTQ9Y2C2 406 aa14.43□□□□□ -0.1
CCL28-202ENST00000489442 OR6C75A6NL08 312 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 C2CD4DB7Z1M9 353 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 CCL16O15467 120 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 CALUO43852 315 aaPredicted RBP14.42□□□□□ -0.1
CCL28-202ENST00000489442 TBC1D4O60343 1298 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 KINO60870 393 aaKnown RBP14.42□□□□□ -0.1
CCL28-202ENST00000489442 ABLIM3O94929 683 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 LRG1P02750 347 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 ATF2P15336 505 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 HOXA9P31269 272 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
CCL28-202ENST00000489442 CYP24A1Q07973 514 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 BFSP1Q12934 665 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 MYO1EQ12965 1108 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 SNW1Q13573 536 aaKnown RBP14.42□□□□□ -0.1
CCL28-202ENST00000489442 RTL10Q7L3V2 364 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 WDR49Q8IV35 697 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 ENGASEQ8NFI3 743 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 ZNF707Q96C28 371 aaPredicted RBP14.42□□□□□ -0.1
CCL28-202ENST00000489442 C1QTNF1Q9BXJ1 281 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 RHOBTB2Q9BYZ6 727 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 EPHX3Q9H6B9 360 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 WDR6Q9NNW5 1121 aaKnown RBP14.42□□□□□ -0.1
CCL28-202ENST00000489442 MUTYHQ9UIF7 546 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 DENND4AQ7Z401 1863 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 CLUHO75153 1309 aa14.42□□□□□ -0.1
CCL28-202ENST00000489442 PI4K2BG5E9Z4 385 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 HUS1O60921 280 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 NR3C1P04150 777 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 ADCY1Q08828 1119 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 PSMD6Q15008 389 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 GRASPQ7Z6J2 395 aaPredicted RBP14.41□□□□□ -0.1
CCL28-202ENST00000489442 TCEAL8Q8IYN2 117 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 LRRC52Q8N7C0 313 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 OR5B17Q8NGF7 314 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 SMARCE1Q969G3 411 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 FAM84AQ96KN4 292 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 TIGD1Q96MW7 591 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 CGRRF1Q99675 332 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 KCTD10Q9H3F6 313 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 AFF4Q9UHB7 1163 aaKnown RBP14.41□□□□□ -0.1
CCL28-202ENST00000489442 MAFFQ9ULX9 164 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 FRMD4BQ9Y2L6 1034 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 PHACTR2O75167 634 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 CLSTN1O94985 981 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 CYP11A1P05108 521 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 OR4Q2P0C623 313 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 MYBPC2Q14324 1141 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 WSCD1Q658N2 575 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 CEP135Q66GS9 1140 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 RNF19BQ6ZMZ0 732 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 SLC9A9Q8IVB4 645 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 ELMOD1Q8N336 334 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 GUF1Q8N442 669 aaKnown RBP14.41□□□□□ -0.1
CCL28-202ENST00000489442 HPDLQ96IR7 371 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 MFSD14AQ96MC6 490 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 PGLYRP2Q96PD5 576 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 GSDMAQ96QA5 445 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 LIMD1Q9UGP4 676 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 SNX9Q9Y5X1 595 aa14.41□□□□□ -0.1
CCL28-202ENST00000489442 DOCK8Q8NF50 2099 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 TSC2P49815 1807 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 PTPRJQ12913 1337 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 GADD45BO75293 160 aaPredicted RBP14.4□□□□□ -0.1
CCL28-202ENST00000489442 SEC24AO95486 1093 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 FSHRP23945 695 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 RPL13P26373 211 aaKnown RBP14.4□□□□□ -0.1
CCL28-202ENST00000489442 GPR17Q13304 367 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 TRPC3Q13507 836 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 GET4Q7L5D6 327 aaPredicted RBP14.4□□□□□ -0.1
CCL28-202ENST00000489442 TRAPPC11Q7Z392 1133 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 ZDHHC14Q8IZN3 488 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 ERCC4Q92889 916 aaPredicted RBP14.4□□□□□ -0.1
CCL28-202ENST00000489442 BORCS6Q96GS4 357 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 GTPBP4Q9BZE4 634 aaKnown RBP14.4□□□□□ -0.1
CCL28-202ENST00000489442 DMAC2Q9NW81 257 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCL28-202ENST00000489442 SIX4Q9UIU6 781 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 TRAF3IP3Q9Y228 551 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 PCDHA5Q9Y5H7 936 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 INSL5Q9Y5Q6 135 aa14.4□□□□□ -0.1
CCL28-202ENST00000489442 PAPLNO95428 1278 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 PTPN2P17706 415 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 NR2F2P24468 414 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 NTHL1P78549 312 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 TSPY1Q01534 308 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 DUSP4Q13115 394 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 BIRC3Q13489 604 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 PABPC1LQ4VXU2 614 aaKnown RBP14.39□□□□□ -0.11
CCL28-202ENST00000489442 SLC39A12Q504Y0 691 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 IQCEQ6IPM2 695 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 SMYD4Q8IYR2 804 aaPredicted RBP14.39□□□□□ -0.11
CCL28-202ENST00000489442 TMEM86AQ8N2M4 240 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 ZNF512Q96ME7 567 aaPredicted RBP14.39□□□□□ -0.11
CCL28-202ENST00000489442 MMS19Q96T76 1030 aa14.39□□□□□ -0.11
CCL28-202ENST00000489442 HCFC1R1Q9NWW0 138 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms