RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 GPC3P51654 580 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 CLCN3P51790 818 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 PSMD2Q13200 908 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 RUNX3Q13761 415 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 ZNF484Q5JVG2 852 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 C20orf194Q5TEA3 1177 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 ZKSCAN2Q63HK3 967 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 MRPL10Q7Z7H8 261 aaKnown RBP8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 NLRX1Q86UT6 975 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 GPIHBP1Q8IV16 184 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 FTSJ3Q8IY81 847 aaKnown RBP8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 LSMEM2Q8N112 164 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 LINC01465Q8N7H1 131 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 DCBLD1Q8N8Z6 715 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 SMARCC2Q8TAQ2 1214 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 SHKBP1Q8TBC3 707 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 SSH1Q8WYL5 1049 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 GPRASP2Q96D09 838 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 TBC1D32Q96NH3 1257 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 KCNK17Q96T54 332 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 FAM83CQ9BQN1 747 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 LRRCC1Q9C099 1032 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 PAG1Q9NWQ8 432 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 ANAPC2Q9UJX6 822 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 TBX20Q9UMR3 447 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 PIN4Q9Y237 131 aaKnown RBP8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 AKT3Q9Y243 479 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 TACC2O95359 2948 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 GCOM1H8Y6P7 765 aaPredicted RBP8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 EFSO43281 561 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 WIPF1O43516 503 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 SLC3A2P08195 630 aaKnown RBP8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 POLR2MP0CAP2 368 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 GLDCP23378 1020 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 SREBF1P36956 1147 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 UQCRFS1P47985 274 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 AMPD2Q01433 879 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 PPARAQ07869 468 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 NAA30Q147X3 362 aaPredicted RBP8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 ALDH1L2Q3SY69 923 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 PCNX4Q63HM2 1172 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 RGL4Q8IZJ4 473 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 LEMD2Q8NC56 503 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 CCDC26Q8TAB7 109 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 BPIFB1Q8TDL5 484 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 VCPIP1Q96JH7 1222 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 CDHR1Q96JP9 859 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 MAP7D2Q96T17 732 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 POLR3CQ9BUI4 534 aaPredicted RBP8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 JPH1Q9HDC5 661 aaPredicted RBP8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 ASCL3Q9NQ33 180 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 BCCIPQ9P287 314 aaKnown RBP eCLIP8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 ANK1P16157 1881 aa8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 ZFC3H1O60293 1989 aaKnown RBP8.42□□□□□ -1.06
EXOSC3-206ENST00000489414 ARID2Q68CP9 1835 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 UBE4BO95155 1302 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 A0A1B0GTW7 788 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 DPYSL4O14531 572 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 PPP1R11O60927 126 aaPredicted RBP8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 SURF6O75683 361 aaKnown RBP8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 DDAH2O95865 285 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 MPOP05164 745 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 IFIT2P09913 472 aaKnown RBP8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 MYL4P12829 197 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 DRD2P14416 443 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 MCM2P49736 904 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 ACADVLP49748 655 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 SF3A1Q15459 793 aaKnown RBP8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 STXBP5Q5T5C0 1151 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 AACSQ86V21 672 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 CEP57Q86XR8 500 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 PLPP6Q8IY26 295 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 SLC34A3Q8N130 599 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 RFFLQ8WZ73 363 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 ZNF419Q96HQ0 510 aaPredicted RBP8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 ZFRQ96KR1 1074 aaKnown RBP8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 CHMP4BQ9H444 224 aaKnown RBP8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 JMJD4Q9H9V9 463 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 SLC9A2Q9UBY0 812 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 TPCN1Q9ULQ1 816 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 CLCA2Q9UQC9 943 aa8.41□□□□□ -1.06
EXOSC3-206ENST00000489414 IGKV6D-21A0A0A0MT36 114 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 ANTXRLA6NF34 631 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 ENC1O14682 589 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 PCDHGA12O60330 932 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 SYNCRIPO60506 623 aaKnown RBP8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 RANBP6O60518 1105 aaKnown RBP8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 MAOBP27338 520 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 ACTR2P61160 394 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 DNAJC3Q13217 504 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 SYCP2LQ5T4T6 812 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 PPP1R26Q5T8A7 1209 aaPredicted RBP8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 FAM171A1Q5VUB5 890 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 CAPRIN2Q6IMN6 1127 aaKnown RBP8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 CCDC33Q8N5R6 958 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 HMGB4Q8WW32 186 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 SLC7A3Q8WY07 619 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 EXOC4Q96A65 974 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 SGF29Q96ES7 293 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 MMS19Q96T76 1030 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms