RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ARIH2O95376 493 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 ANXA1P04083 346 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 FTH1P19P0C7X4 201 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 GATA3P23771 443 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 AVPR1BP47901 424 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 CLK3P49761 638 aaKnown RBP4.77□□□□□ -1.65
RFC4-213ENST00000489028 ZNF135P52742 658 aaPredicted RBP4.77□□□□□ -1.65
RFC4-213ENST00000489028 POU6F2P78424 691 aaPredicted RBP4.77□□□□□ -1.65
RFC4-213ENST00000489028 NKX6-1P78426 367 aaPredicted RBP4.77□□□□□ -1.65
RFC4-213ENST00000489028 BLOC1S1P78537 153 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 ZNF844Q08AG5 666 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 MPP3Q13368 585 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 PLS1Q14651 629 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 KIF22Q14807 665 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 SF3B3Q15393 1217 aaKnown RBP4.77□□□□□ -1.65
RFC4-213ENST00000489028 IFIT1BQ5T764 474 aaKnown RBP4.77□□□□□ -1.65
RFC4-213ENST00000489028 THEMIS2Q5TEJ8 643 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 SP5Q6BEB4 398 aaPredicted RBP4.77□□□□□ -1.65
RFC4-213ENST00000489028 B3GNT9Q6UX72 402 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 Q6ZNX1 250 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 CLNKQ7Z7G1 428 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 PDSS2Q86YH6 399 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 ADGRG5Q8IZF4 528 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 LNX2Q8N448 690 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 SCAMP4Q969E2 229 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 MAP3K14Q99558 947 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 CGRRF1Q99675 332 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 AIFM2Q9BRQ8 373 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 SMOC2Q9H3U7 446 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 WDCPQ9H6R7 721 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 GPR35Q9HC97 309 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 CASS4Q9NQ75 786 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 ANLNQ9NQW6 1124 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 KCTD5Q9NXV2 234 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 ZIM2Q9NZV7 527 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 FEZ2Q9UHY8 353 aaPredicted RBP4.77□□□□□ -1.65
RFC4-213ENST00000489028 PCDHA1Q9Y5I3 950 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 AP1G1O43747 822 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 OFD1O75665 1012 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 GNAI3P08754 354 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 RARBP10826 455 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 VCAM1P19320 739 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 BMP5P22003 454 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 TOB1P50616 345 aaPredicted RBP4.76□□□□□ -1.65
RFC4-213ENST00000489028 ANXA11P50995 505 aaKnown RBP4.76□□□□□ -1.65
RFC4-213ENST00000489028 EPHB1P54762 984 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 GNAI1P63096 354 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 DYRK1AQ13627 763 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 LRRC41Q15345 812 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 SMN1Q16637 294 aaKnown RBP4.76□□□□□ -1.65
RFC4-213ENST00000489028 ODR4Q5SWX8 454 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 COLGALT2Q8IYK4 626 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 SLC30A5Q8TAD4 765 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 PPP1R35Q8TAP8 253 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 DIS3LQ8TF46 1054 aaKnown RBP4.76□□□□□ -1.65
RFC4-213ENST00000489028 LPIN2Q92539 896 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 TNPO1Q92973 898 aaKnown RBP4.76□□□□□ -1.65
RFC4-213ENST00000489028 LRGUKQ96M69 825 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 TRIB1Q96RU8 372 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 KMT5AQ9NQR1 393 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 PNPOQ9NVS9 261 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 RLIMQ9NVW2 624 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 CFAP97Q9P2B7 532 aa4.76□□□□□ -1.65
RFC4-213ENST00000489028 PNMA8BQ9ULN7 279 aaPredicted RBP4.76□□□□□ -1.65
RFC4-213ENST00000489028 E2F8A0AVK6 867 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 POLRMTO00411 1230 aaKnown RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 KIAA0355O15063 1070 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 PRPF3O43395 683 aaKnown RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 KIF20AO95235 890 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 CT47B1P0C2W7 299 aaPredicted RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 RPS7P62081 194 aaKnown RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 FPGSQ05932 587 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 EXOSC9Q06265 439 aaKnown RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 PIGFQ07326 219 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 TCF15Q12870 199 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 BOP1Q14137 746 aaKnown RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 HABP2Q14520 560 aaPredicted RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 VWA1Q6PCB0 445 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 SLC30A10Q6XR72 485 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 TSHZ1Q6ZSZ6 1077 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 EPM2AIP1Q7L775 607 aaPredicted RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 AOPEPQ8N6M6 819 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 POC1BQ8TC44 478 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 ZG16BQ96DA0 208 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 SLC35A4Q96G79 324 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 LRFN3Q9BTN0 628 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 TINAGL1Q9GZM7 467 aaPredicted RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 GNL3LQ9NVN8 582 aaKnown RBP4.75□□□□□ -1.65
RFC4-213ENST00000489028 FOXJ2Q9P0K8 574 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 ZDHHC8Q9ULC8 765 aa4.75□□□□□ -1.65
RFC4-213ENST00000489028 H3BUI4 141 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 TOR1BO14657 336 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 VPS4BO75351 444 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 SRGNP10124 158 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 MYBP10242 640 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 HDCP19113 662 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 CHRM3P20309 590 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 PTH2RP49190 550 aa4.74□□□□□ -1.65
RFC4-213ENST00000489028 HNRNPMP52272 730 aaKnown RBP eCLIP4.74□□□□□ -1.65
RFC4-213ENST00000489028 NANOS3P60323 173 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms