RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 IER5LQ5T953 404 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 CYP4A22Q5TCH4 519 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 RESP18Q5W5W9 173 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 RNF19BQ6ZMZ0 732 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 EFCAB13Q8IY85 973 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 GPD1LQ8N335 351 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 FLCNQ8NFG4 579 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 FGF14Q92915 247 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 ZNF512Q96ME7 567 aaPredicted RBP14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 C7orf25Q9BPX7 421 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 RTP3Q9BQQ7 232 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 CORO1BQ9BR76 489 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 FGFBP2Q9BYJ0 223 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 ASAH2Q9NR71 780 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 SLC2A4RGQ9NR83 387 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 PCDHA7Q9UN72 937 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 YIPF1Q9Y548 306 aa14.92□□□□□ -0.02
SPTLC1-207ENST00000488921 SPTLC1O15269 473 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 AOC1P19801 751 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 ANP32AP39687 249 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 TFAMQ00059 246 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 DNM1Q05193 864 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 PKP1Q13835 747 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 SURF1Q15526 300 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 SLC5A9Q2M3M2 681 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 CWF19L1Q69YN2 538 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 PARM1Q6UWI2 310 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 UNC13DQ70J99 1090 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 CEP57L1Q8IYX8 460 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 THEM5Q8N1Q8 247 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 TMEM105Q8N8V8 129 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 NOC3LQ8WTT2 800 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 ING5Q8WYH8 240 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 CBWD1Q9BRT8 395 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 HSFX1Q9UBD0 423 aa14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 NUP210Q8TEM1 1887 aaPredicted RBP14.91□□□□□ -0.02
SPTLC1-207ENST00000488921 KPNA7A9QM74 516 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 CYB561D2O14569 222 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 GALR2O43603 387 aaPredicted RBP14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 OR4Q2P0C623 313 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 TMEM191BP0C7N4 346 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 CEBPBP17676 345 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 ALDH1A3P47895 512 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 EPHB3P54753 998 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 KRT85P78386 507 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 PFKPQ01813 784 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 PRSS36Q5K4E3 855 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 GPR152Q8TDT2 470 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 PGLYRP2Q96PD5 576 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 PCIF1Q9H4Z3 704 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 KIAA1586Q9HCI6 787 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 ARHGEF3Q9NR81 526 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 RCOR1Q9UKL0 485 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 ITGA11Q9UKX5 1188 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 CA14Q9ULX7 337 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 R3HCC1Q9Y3T6 440 aaKnown RBP14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 ATP6V1DQ9Y5K8 247 aa14.9□□□□□ -0.02
SPTLC1-207ENST00000488921 PVALEFA0A1B0GWK0 134 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 MTMR11A4FU01 709 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 GOLGA8IPA6NC78 632 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 GOLGA8JA6NMD2 632 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 TULP1O00294 542 aaPredicted RBP14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 STK25O00506 426 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 ECI2O75521 394 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 ITGB3P05106 788 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 POLR2BP30876 1174 aaKnown RBP14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 EPHA5P54756 1037 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 SNRPFP62306 86 aaKnown RBP14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 SMARCB1Q12824 385 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 TCF15Q12870 199 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 DUSP4Q13115 394 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 BECN1Q14457 450 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 CENPPQ6IPU0 288 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 EPM2AIP1Q7L775 607 aaPredicted RBP14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 HS2ST1Q7LGA3 356 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 LRRC52Q8N7C0 313 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 ZNF507Q8TCN5 953 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 C2orf15Q8WU43 125 aaKnown RBP14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 HPS3Q969F9 1004 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 MCRS1Q96EZ8 462 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 SHDQ96IW2 340 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 ANKRD36BP1Q96IX9 119 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 KXD1Q9BQD3 176 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 CEP72Q9P209 647 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 ASB3Q9Y575 518 aa14.89□□□□□ -0.03
SPTLC1-207ENST00000488921 KRBA1A5PL33 1030 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 ZNF233A6NK53 670 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 VNN2O95498 520 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 FGF19O95750 216 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 NPR3P17342 541 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 TUFMP49411 452 aaKnown RBP14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 SLC39A12Q504Y0 691 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 PHLDB3Q6NSJ2 640 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 ITIH5Q86UX2 942 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 C1orf127Q8N9H9 656 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 GLIS3Q8NEA6 775 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 ZSWIM2Q8NEG5 633 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 OR10T2Q8NGX3 314 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 SPATA18Q8TC71 538 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 SPPL2BQ8TCT7 592 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms