RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 OTOP2Q7RTS6 562 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 TDHQ8IZJ6 230 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 ABI1Q8IZP0 508 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 C3orf58Q8NDZ4 430 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 ZNF560Q96MR9 790 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 UROC1Q96N76 676 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 NRDE2Q9H7Z3 1164 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 CYP3A43Q9HB55 503 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 GDAP2Q9NXN4 497 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 SNX9Q9Y5X1 595 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 SOWAHDA6NJG2 315 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 DGKIO75912 1065 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 KRT5P13647 590 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 P4HA1P13674 534 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 CD58P19256 250 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 EIF4A3P38919 411 aaKnown RBP16.19■□□□□ 0.18
CTNS-206ENST00000488623 RNASELQ05823 741 aaKnown RBP16.19■□□□□ 0.18
CTNS-206ENST00000488623 KLHL30Q0D2K2 578 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 MTF1Q14872 753 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 SV2CQ496J9 727 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 DCLRE1AQ6PJP8 1040 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 RAD9BQ6WBX8 426 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 LIMS2Q7Z4I7 341 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 TMCO2Q7Z6W1 182 aaPredicted RBP16.19■□□□□ 0.18
CTNS-206ENST00000488623 LRCH3Q96II8 777 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 FAM193BQ96PV7 902 aaPredicted RBP16.19■□□□□ 0.18
CTNS-206ENST00000488623 MMS19Q96T76 1030 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 LBHD1Q9BQE6 289 aaPredicted RBP16.19■□□□□ 0.18
CTNS-206ENST00000488623 HAUS4Q9H6D7 363 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 NHEJ1Q9H9Q4 299 aaPredicted RBP16.19■□□□□ 0.18
CTNS-206ENST00000488623 CISHQ9NSE2 258 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.19■□□□□ 0.18
CTNS-206ENST00000488623 DNAJB4Q9UDY4 337 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
CTNS-206ENST00000488623 CALCAP01258 141 aa16.18■□□□□ 0.18
CTNS-206ENST00000488623 SOWAHAQ2M3V2 549 aa16.18■□□□□ 0.18
CTNS-206ENST00000488623 ASTE1Q2TB18 679 aaPredicted RBP16.18■□□□□ 0.18
CTNS-206ENST00000488623 PAN2Q504Q3 1202 aaKnown RBP16.18■□□□□ 0.18
CTNS-206ENST00000488623 TMEM270Q6UE05 265 aa16.18■□□□□ 0.18
CTNS-206ENST00000488623 ZNF571Q7Z3V5 609 aaPredicted RBP16.18■□□□□ 0.18
CTNS-206ENST00000488623 WHAMMQ8TF30 809 aa16.18■□□□□ 0.18
CTNS-206ENST00000488623 ZNF689Q96CS4 500 aaPredicted RBP16.18■□□□□ 0.18
CTNS-206ENST00000488623 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.18
CTNS-206ENST00000488623 ACP6Q9NPH0 428 aa16.18■□□□□ 0.18
CTNS-206ENST00000488623 HCSTQ9UBK5 93 aa16.18■□□□□ 0.18
CTNS-206ENST00000488623 BZW2Q9Y6E2 419 aaKnown RBP16.18■□□□□ 0.18
CTNS-206ENST00000488623 PTPRSQ13332 1948 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 SSU72P8A0A1W2PR75 194 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 F8W810 466 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 CYB561D2O14569 222 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 ARHGAP6O43182 974 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 NRDCO43847 1150 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 CCDC172P0C7W6 258 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 ZNF132P52740 706 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 YWHAEP62258 255 aaKnown RBP16.17■□□□□ 0.18
CTNS-206ENST00000488623 PTK2Q05397 1052 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 TIGD5Q53EQ6 642 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 SMYD5Q6GMV2 418 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 FAM117BQ6P1L5 589 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 SLC47A2Q86VL8 602 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 FMNL3Q8IVF7 1028 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 RBBP8NLQ8NC74 664 aaPredicted RBP16.17■□□□□ 0.18
CTNS-206ENST00000488623 OLIG1Q8TAK6 271 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 RSPH1Q8WYR4 309 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 SENP8Q96LD8 212 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 MRPL45Q9BRJ2 306 aaKnown RBP16.17■□□□□ 0.18
CTNS-206ENST00000488623 SYT11Q9BT88 431 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 MRPL9Q9BYD2 267 aaKnown RBP16.17■□□□□ 0.18
CTNS-206ENST00000488623 COL4A6Q14031 1691 aa16.17■□□□□ 0.18
CTNS-206ENST00000488623 ZBBXA8MT70 800 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 NRP1O14786 923 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 CILPO75339 1184 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 B3GAT3O94766 335 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 ITGB1P05556 798 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 FAM163BP0C2L3 166 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 CHRNB2P17787 502 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 BRCC3P46736 316 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 OR1G1P47890 313 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 KCNJ6P48051 423 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 SLC11A1P49279 550 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 AARSP49588 968 aaKnown RBP eCLIP16.16■□□□□ 0.18
CTNS-206ENST00000488623 INCA1Q0VD86 236 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 TDRD12Q587J7 1177 aaKnown RBP16.16■□□□□ 0.18
CTNS-206ENST00000488623 DPH6Q7L8W6 267 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 NOP9Q86U38 636 aaKnown RBP16.16■□□□□ 0.18
CTNS-206ENST00000488623 CCDC170Q8IYT3 715 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 TOP6BLQ8N6T0 577 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 KBTBD7Q8WVZ9 684 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 HERVK_113Q902F9 699 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 CCDC42Q96M95 316 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 TWNKQ96RR1 684 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 ELOVL4Q9GZR5 314 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 CWH43Q9H720 699 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 RC3H2Q9HBD1 1191 aaKnown RBP16.16■□□□□ 0.18
CTNS-206ENST00000488623 CXXC1Q9P0U4 656 aaPredicted RBP16.16■□□□□ 0.18
CTNS-206ENST00000488623 NOCTQ9UK39 431 aaKnown RBP16.16■□□□□ 0.18
CTNS-206ENST00000488623 L1RE1Q9UN81 338 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 NME7Q9Y5B8 376 aa16.16■□□□□ 0.18
CTNS-206ENST00000488623 EPN1Q9Y6I3 576 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms