RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 NPNTQ6UXI9 565 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 GADL1Q6ZQY3 521 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 SPATA31D4Q6ZUB0 917 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 SLC44A3Q8N4M1 653 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 DCBLD1Q8N8Z6 715 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 C3orf20Q8ND61 904 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 KLHDC4Q8TBB5 520 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 NT5C1BQ96P26 610 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 MRI1Q9BV20 369 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 KMT5AQ9NQR1 393 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 PRDM11Q9NQV5 511 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 RNF181Q9P0P0 153 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 SLC23A1Q9UHI7 598 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 PNPLA7Q6ZV29 1317 aa4.13□□□□□ -1.75
CD46-215ENST00000488596 TCRBV7S2A1N4TA0A589 114 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 CXorf49A8MYA2 514 aaPredicted RBP4.12□□□□□ -1.75
CD46-215ENST00000488596 CAND2O75155 1236 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 MAP4K4O95819 1239 aaPredicted RBP4.12□□□□□ -1.75
CD46-215ENST00000488596 CFIP05156 583 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 SMARCA1P28370 1054 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 FLT3LGP49771 235 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 CHN2P52757 468 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 HK3P52790 923 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 ELLP55199 621 aaPredicted RBP4.12□□□□□ -1.75
CD46-215ENST00000488596 CTXN1P60606 82 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 RAP2BP61225 183 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 BLOC1S1P78537 153 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 SP140Q13342 867 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 RAB39AQ14964 217 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 THEMIS2Q5TEJ8 643 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 AGAP9Q5VTM2 703 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 UBE3BQ7Z3V4 1068 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 HEATR3Q7Z4Q2 680 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 GPR149Q86SP6 731 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 CCAR1Q8IX12 1150 aaKnown RBP4.12□□□□□ -1.75
CD46-215ENST00000488596 FAM156AQ8NDB6 213 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 B3GNT5Q9BYG0 378 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 LMBRD1Q9NUN5 540 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 SLC52A1Q9NWF4 448 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 MOCS1Q9NZB8 636 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 ABCF2Q9UG63 623 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 STAP2Q9UGK3 403 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 FAM50BQ9Y247 325 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 POLHQ9Y253 713 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 STXBP5LQ9Y2K9 1186 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 FRMD4BQ9Y2L6 1034 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 PCDHA1Q9Y5I3 950 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 MAST3O60307 1309 aa4.12□□□□□ -1.75
CD46-215ENST00000488596 F2RL2O00254 374 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 KIAA0391O15091 583 aaKnown RBP4.11□□□□□ -1.75
CD46-215ENST00000488596 CDKL5O76039 1030 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 MATN4O95460 622 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 IGLV2-14P01704 120 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 KRT18P05783 430 aaKnown RBP4.11□□□□□ -1.75
CD46-215ENST00000488596 ATP5JP18859 108 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 NKX6-1P78426 367 aaPredicted RBP4.11□□□□□ -1.75
CD46-215ENST00000488596 FLYWCH1Q4VC44 716 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 CYB5RLQ6IPT4 315 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 CCDC149Q6ZUS6 474 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 CHST15Q7LFX5 561 aaPredicted RBP4.11□□□□□ -1.75
CD46-215ENST00000488596 DAAM2Q86T65 1068 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 CCDC146Q8IYE0 955 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 CELF5Q8N6W0 485 aaKnown RBP4.11□□□□□ -1.75
CD46-215ENST00000488596 ZFP28Q8NHY6 868 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 CAGE1Q8TC20 777 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 CASKIN2Q8WXE0 1202 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 NELL1Q92832 810 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 CDK5RAP3Q96JB5 506 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 PHACTR3Q96KR7 559 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 Q96MF0 132 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 SPATA5L1Q9BVQ7 753 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 MAN1C1Q9NR34 630 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 PNPOQ9NVS9 261 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 CALCOCO1Q9P1Z2 691 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 TLK1Q9UKI8 766 aa4.11□□□□□ -1.75
CD46-215ENST00000488596 NT5C1B-RDH14C9J2C7 533 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 TPP1O14773 563 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 GRM6O15303 877 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 SLC16A6O15403 523 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 C1RP00736 705 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 FOSP01100 380 aaPredicted RBP4.1□□□□□ -1.75
CD46-215ENST00000488596 TYRP14679 529 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 PHKA1P46020 1223 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 CLRN1P58418 232 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 SIM1P81133 766 aaPredicted RBP4.1□□□□□ -1.75
CD46-215ENST00000488596 CREMQ03060 361 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 PLS1Q14651 629 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 ZNF169Q14929 603 aaPredicted RBP4.1□□□□□ -1.75
CD46-215ENST00000488596 UBXN2BQ14CS0 331 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 KIAA0753Q2KHM9 967 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 ANO6Q4KMQ2 910 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 COBLL1Q53SF7 1204 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 ATXN7L2Q5T6C5 722 aaPredicted RBP4.1□□□□□ -1.75
CD46-215ENST00000488596 B3GNTL1Q67FW5 361 aaPredicted RBP4.1□□□□□ -1.75
CD46-215ENST00000488596 OTUD7BQ6GQQ9 843 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 PPP4R4Q6NUP7 873 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 SWSAP1Q6NVH7 229 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 ZNF529Q6P280 563 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 PPP1R3BQ86XI6 285 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 RHOT2Q8IXI1 618 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms