RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 TRPA1O75762 1119 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 HSPA1LP34931 641 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 KRT6CP48668 564 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 CDK9P50750 372 aaKnown RBP6.69□□□□□ -1.34
SIK3-212ENST00000488337 SELENBP1Q13228 472 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 PPP2R5CQ13362 524 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 SGO2Q562F6 1265 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 SLX4IPQ5VYV7 408 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 CALML6Q8TD86 181 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 SCFD2Q8WU76 684 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 MXD3Q9BW11 206 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 KLC2Q9H0B6 622 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 ZC3H7BQ9UGR2 993 aaKnown RBP6.69□□□□□ -1.34
SIK3-212ENST00000488337 VANGL2Q9ULK5 521 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 AXIN2Q9Y2T1 843 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 AK5Q9Y6K8 562 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 ZNFX1Q9P2E3 1918 aaKnown RBP6.69□□□□□ -1.34
SIK3-212ENST00000488337 ZSCAN5BA6NJL1 495 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 TSPAN7P41732 249 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 RAP1GDS1P52306 607 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 SPAG1Q07617 926 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 DNAJC3Q13217 504 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 MAP3K21Q5TCX8 1036 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 PEX26Q7Z412 305 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 HEATR4Q86WZ0 1026 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 GRAMD1CQ8IYS0 662 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 APPL2Q8NEU8 664 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 MS4A14Q96JA4 679 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 SCYL1Q96KG9 808 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 PHF20Q9BVI0 1012 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 CDCA7Q9BWT1 371 aaPredicted RBP6.69□□□□□ -1.34
SIK3-212ENST00000488337 MRPS26Q9BYN8 205 aaKnown RBP6.69□□□□□ -1.34
SIK3-212ENST00000488337 IMPG2Q9BZV3 1241 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 CUEDC2Q9H467 287 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.69□□□□□ -1.34
SIK3-212ENST00000488337 DNMT3BQ9UBC3 853 aaKnown RBP6.69□□□□□ -1.34
SIK3-212ENST00000488337 CPDO75976 1380 aa6.69□□□□□ -1.34
SIK3-212ENST00000488337 A0A1W2PQC6 194 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 TCP11X1B4DZS4 312 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 DENRO43583 198 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 ITM2AO43736 263 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 RNASEH2AO75792 299 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 RARBP10826 455 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ESRRAP11474 423 aaPredicted RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 P4HA1P13674 534 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 HNRNPH3P31942 346 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 PIK3CAP42336 1068 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 IFI35P80217 286 aaPredicted RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 PDAP1Q13442 181 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 TCIRG1Q13488 830 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 KRT31Q15323 416 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 CFAP221Q4G0U5 840 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 TMEM63BQ5T3F8 832 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 TTLQ8NG68 377 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ADAMTS16Q8TE57 1224 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ZUFSPQ96AP4 578 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 VPS16Q9H269 839 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 SAR1AQ9NR31 198 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 LRRC4BQ9NT99 713 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 TBK1Q9UHD2 729 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 RBMX2Q9Y388 322 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 KRBA1A5PL33 1030 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ANKRD62A6NC57 917 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 PPP1R3GB7ZBB8 358 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 NMT2O60551 498 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 GPC4O75487 556 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 CIAO1O76071 339 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 MAP3K6O95382 1288 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ICAM2P13598 275 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 PTPREP23469 700 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 RFC4P35249 363 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 IGHMBP2P38935 993 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 CENPAP49450 140 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ATN1P54259 1190 aaPredicted RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 ANTXR2P58335 489 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 POLR2GP62487 172 aaKnown RBP eCLIP6.68□□□□□ -1.34
SIK3-212ENST00000488337 FOXO4P98177 505 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 GFPT1Q06210 699 aaPredicted RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 KRT71Q3SY84 523 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 LEXMQ3ZCV2 418 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 TJAP1Q5JTD0 557 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 C6orf132Q5T0Z8 1188 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 VSTM1Q6UX27 236 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 KCTD20Q7Z5Y7 419 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 PRPF31Q8WWY3 499 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 BORCS5Q969J3 196 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 GRAMD1AQ96CP6 724 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 FAM89AQ96GI7 184 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 LPIN3Q9BQK8 851 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 HOXD1Q9GZZ0 328 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 RUBCNLQ9H714 662 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 SLC38A10Q9HBR0 1119 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 DCCP43146 1447 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ARPC4-TTLL3A0A0A6YYG9 625 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ARHGAP10A1A4S6 786 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 GOLGA8IPA6NC78 632 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ARHGEF15O94989 841 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 PGM3O95394 542 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 DEXIO95424 95 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 PCNAP12004 261 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms