RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 THAP9Q9H5L6 903 aa11.88□□□□□ -0.51
UBE4B-210ENST00000488228 METTL14Q9HCE5 456 aaKnown RBP11.88□□□□□ -0.51
UBE4B-210ENST00000488228 TMEM8AQ9HCN3 771 aa11.88□□□□□ -0.51
UBE4B-210ENST00000488228 SAMSN1Q9NSI8 373 aaKnown RBP11.88□□□□□ -0.51
UBE4B-210ENST00000488228 MTRRQ9UBK8 725 aa11.88□□□□□ -0.51
UBE4B-210ENST00000488228 POLIQ9UNA4 740 aa11.88□□□□□ -0.51
UBE4B-210ENST00000488228 NFE2L3Q9Y4A8 694 aa11.88□□□□□ -0.51
UBE4B-210ENST00000488228 IRAK3Q9Y616 596 aa11.88□□□□□ -0.51
UBE4B-210ENST00000488228 HCRTO43612 131 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 TBX10O75333 385 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 FGFR1OPO95684 399 aaKnown RBP11.87□□□□□ -0.51
UBE4B-210ENST00000488228 GNA14O95837 355 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 GLP2RO95838 553 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 EPCAMP16422 314 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 TYMPP19971 482 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 GTF2H1P32780 548 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 RAP1GAPP47736 663 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 FMO5P49326 533 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 NDUFV1P49821 464 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 MARSP56192 900 aaKnown RBP11.87□□□□□ -0.51
UBE4B-210ENST00000488228 MCCD1P59942 119 aaPredicted RBP11.87□□□□□ -0.51
UBE4B-210ENST00000488228 NOP14P78316 857 aaKnown RBP11.87□□□□□ -0.51
UBE4B-210ENST00000488228 MYL5Q02045 173 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 YWHAHQ04917 246 aaPredicted RBP11.87□□□□□ -0.51
UBE4B-210ENST00000488228 CTXN3Q4LDR2 81 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 CT47A1Q5JQC4 288 aaPredicted RBP11.87□□□□□ -0.51
UBE4B-210ENST00000488228 KRT39Q6A163 491 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 OVOS1Q6IE37 1185 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 ANKS3Q6ZW76 656 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 OSTM1Q86WC4 334 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 ADGRF2Q8IZF7 708 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 PDCL2Q8N4E4 241 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 APPL2Q8NEU8 664 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 ENOX1Q8TC92 643 aaKnown RBP11.87□□□□□ -0.51
UBE4B-210ENST00000488228 SEMA4DQ92854 862 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 PPP2R3CQ969Q6 453 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 CLSTN3Q9BQT9 956 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 EMILIN2Q9BXX0 1053 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 SMYD3Q9H7B4 428 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 RXFP1Q9HBX9 757 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 PRDM6Q9NQX0 595 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBE4B-210ENST00000488228 NXF1Q9UBU9 619 aaKnown RBP11.87□□□□□ -0.51
UBE4B-210ENST00000488228 HCFC2Q9Y5Z7 792 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 CDY1Q9Y6F8 540 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 PATJQ8NI35 1801 aa11.87□□□□□ -0.51
UBE4B-210ENST00000488228 KCNJ18B7U540 433 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 STX10O60499 249 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 HUS1O60921 280 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 LETM1O95202 739 aaPredicted RBP11.86□□□□□ -0.51
UBE4B-210ENST00000488228 ASS1P00966 412 aaKnown RBP11.86□□□□□ -0.51
UBE4B-210ENST00000488228 ADH1AP07327 375 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 OR4Q2P0C623 313 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 KLRC2P26717 231 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 MTIF2P46199 727 aaKnown RBP11.86□□□□□ -0.51
UBE4B-210ENST00000488228 CDR1P51861 262 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 ARPP19P56211 112 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 TNNC1P63316 161 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 ROR1Q01973 937 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 CREMQ03060 361 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 KCNJ12Q14500 433 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 CCDC142Q17RM4 750 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 WDR72Q3MJ13 1102 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 ZNF667Q5HYK9 610 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 CDKAL1Q5VV42 579 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 PDXDC1Q6P996 788 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 EP400NLQ6ZTU2 488 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 PALB2Q86YC2 1186 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 FAM114A1Q8IWE2 563 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 EFHBQ8N7U6 833 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 FBXL13Q8NEE6 735 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 OR10T2Q8NGX3 314 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 KBTBD7Q8WVZ9 684 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 TMEM209Q96SK2 561 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 RTP3Q9BQQ7 232 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 APOBEC3GQ9HC16 384 aaKnown RBP11.86□□□□□ -0.51
UBE4B-210ENST00000488228 GDAP2Q9NXN4 497 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 CLDND1Q9NY35 253 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 FBXL5Q9UKA1 691 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 BARX2Q9UMQ3 279 aaPredicted RBP11.86□□□□□ -0.51
UBE4B-210ENST00000488228 SSX2IPQ9Y2D8 614 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
UBE4B-210ENST00000488228 OBSL1O75147 1896 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 MYO16Q9Y6X6 1858 aa11.86□□□□□ -0.51
UBE4B-210ENST00000488228 XIRP2A4UGR9 3374 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 ARHGEF37A1IGU5 675 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 H7C4K7 107 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 OAZ2O95190 189 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 GLUD1P00367 558 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 AFPP02771 609 aaKnown RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 CYP11A1P05108 521 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 SPATA31D3P0C874 917 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 CPB1P15086 417 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 PAX3P23760 479 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 ACAT1P24752 427 aaKnown RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 ATICP31939 592 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 OR1D2P34982 312 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 ASPAP45381 313 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 CLCN4P51793 760 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms