RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 Q6ZVL8 140 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 ZBTB34Q8NCN2 500 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 ZFP28Q8NHY6 868 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 NSUN6Q8TEA1 469 aaKnown RBP4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 SLC9A6Q92581 669 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 TFAP2CQ92754 450 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 RUNDC1Q96C34 613 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 NEU1Q99519 415 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 PACSIN1Q9BY11 444 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 C11orf54Q9H0W9 315 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 ANLNQ9NQW6 1124 aa4.72□□□□□ -1.65
HMGB1P36-201ENST00000487709 H3BUI4 141 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 MGEA5O60502 916 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 CDKL5O76039 1030 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 FDXRP22570 491 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 HTR1BP28222 390 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 GUCY1A2P33402 732 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 CTXN1P60606 82 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 FAM193AP78312 1265 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 SIM1P81133 766 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 NOGQ13253 232 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 ANO6Q4KMQ2 910 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 FAM102AQ5T9C2 384 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 CCDC149Q6ZUS6 474 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 OR2I1PQ8NGU4 316 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 BRIX1Q8TDN6 353 aaKnown RBP4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 PHACTR3Q96KR7 559 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 Q96MF0 132 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 ACO2Q99798 780 aaKnown RBP4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 LDAHQ9H6V9 325 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 SARS2Q9NP81 518 aaKnown RBP4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 MAST3O60307 1309 aa4.71□□□□□ -1.66
HMGB1P36-201ENST00000487709 CAPN8A6NHC0 703 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 LRRC3CA6NJW4 275 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 PRPF3O43395 683 aaKnown RBP4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 UBXN7O94888 489 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 FOSP01100 380 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 EDNRBP24530 442 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 SLC6A9P48067 706 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 HK3P52790 923 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 GPSM2P81274 684 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 MTM1Q13496 603 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 ZNF169Q14929 603 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 AFMIDQ63HM1 303 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 DARS2Q6PI48 645 aaKnown RBP4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 B3GNT9Q6UX72 402 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 KSR2Q6VAB6 950 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 HEATR3Q7Z4Q2 680 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 C11orf96Q7Z7L8 435 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 GPR149Q86SP6 731 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 CGRRF1Q99675 332 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 MRI1Q9BV20 369 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 SIK2Q9H0K1 926 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 TMEM60Q9H2L4 133 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 RUVBL1Q9Y265 456 aaKnown RBP4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 PCDHB1Q9Y5F3 818 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 NR2E3Q9Y5X4 410 aa4.7□□□□□ -1.66
HMGB1P36-201ENST00000487709 COL3A1P02461 1466 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 A0A1W2PPL8 197 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 TBKBP1A7MCY6 615 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 KIAA0391O15091 583 aaKnown RBP4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 C1QL1O75973 258 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 POMCP01189 267 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 GNAI2P04899 355 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 CD1AP06126 327 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 ALOX15P16050 662 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 MALP21145 153 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 CTGFP29279 349 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 ALDH1A3P47895 512 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 FXR1P51114 621 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 ZNF81P51508 661 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 MAP2K6P52564 334 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 CLRN1P58418 232 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 RAP2BP61225 183 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 NHLH1Q02575 133 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 TLE1Q04724 770 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 SCAPQ12770 1279 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 TARDBPQ13148 414 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 PICALMQ13492 652 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 FGL2Q14314 439 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 KHDC1Q4VXA5 237 aaKnown RBP4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 PABPC1LQ4VXU2 614 aaKnown RBP4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 METRNLQ641Q3 311 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 OTUD7BQ6GQQ9 843 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 Q6ZNX1 250 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 ZNF366Q8N895 744 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 REPS2Q8NFH8 660 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 KLHDC4Q8TBB5 520 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 IFI44Q8TCB0 444 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 SLC35A4Q96G79 324 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 SEMA4GQ9NTN9 838 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 SIDT1Q9NXL6 827 aaKnown RBP4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 CFAP97Q9P2B7 532 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 ABCF2Q9UG63 623 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 SIK3Q9Y2K2 1263 aa4.69□□□□□ -1.66
HMGB1P36-201ENST00000487709 CCDC194A0A1B0GVG4 234 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 GOLIM4O00461 696 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 TUSC2O75896 110 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 HAUS5O94927 633 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms