RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 GPR17Q13304 367 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 MYBPC2Q14324 1141 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 SLC5A9Q2M3M2 681 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 IER5LQ5T953 404 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 PARM1Q6UWI2 310 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 GRAMD1CQ8IYS0 662 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 CEP57L1Q8IYX8 460 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 NOC3LQ8WTT2 800 aaKnown RBP12.37□□□□□ -0.43
SPEN-205ENST00000487496 SCFD1Q8WVM8 642 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 FAM122AQ96E09 287 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 PGLYRP2Q96PD5 576 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 CORO1BQ9BR76 489 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 RPP25Q9BUL9 199 aaKnown RBP12.37□□□□□ -0.43
SPEN-205ENST00000487496 PDE11AQ9HCR9 933 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 AVENQ9NQS1 362 aaPredicted RBP12.37□□□□□ -0.43
SPEN-205ENST00000487496 MRPS23Q9Y3D9 190 aaKnown RBP12.37□□□□□ -0.43
SPEN-205ENST00000487496 NUMBLQ9Y6R0 609 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 ANK1P16157 1881 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 TRIOO75962 3097 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 KPNA7A9QM74 516 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 ITGB3P05106 788 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 PFKFB1P16118 471 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 POLR2BP30876 1174 aaKnown RBP12.36□□□□□ -0.43
SPEN-205ENST00000487496 TWF1Q12792 350 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 DUSP4Q13115 394 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 SV2CQ496J9 727 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 WSCD1Q658N2 575 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 SCARA3Q6AZY7 606 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 IQCEQ6IPM2 695 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 CBWD2Q8IUF1 395 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 NPAS3Q8IXF0 933 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 C1orf127Q8N9H9 656 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 OR10T2Q8NGX3 314 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 CXorf38Q8TB03 319 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 CACTINQ8WUQ7 758 aaKnown RBP12.36□□□□□ -0.43
SPEN-205ENST00000487496 ING5Q8WYH8 240 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 FGF14Q92915 247 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 PAGE5Q96GU1 130 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 FAM84AQ96KN4 292 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 TMEM209Q96SK2 561 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 RTP3Q9BQQ7 232 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 CRISPLD1Q9H336 500 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 AGPAT3Q9NRZ7 376 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 HSPBP1Q9NZL4 362 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 CEP72Q9P209 647 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 DSEQ9UL01 958 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 AGAP1Q9UPQ3 857 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 HPSEQ9Y251 543 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 ATP6V1DQ9Y5K8 247 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 UBE4BO95155 1302 aa12.36□□□□□ -0.43
SPEN-205ENST00000487496 NOTCH4Q99466 2003 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 MUC6Q6W4X9 2439 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 FAM237AA0A1B0GTK4 181 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 MTMR11A4FU01 709 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 ZNF233A6NK53 670 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 CFHP08603 1231 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 SRFP11831 508 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 PNPLA4P41247 253 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 SNRPFP62306 86 aaKnown RBP12.35□□□□□ -0.43
SPEN-205ENST00000487496 BMT2Q1RMZ1 405 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 PRSS36Q5K4E3 855 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 CYP4A22Q5TCH4 519 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 CENPPQ6IPU0 288 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 POTEHQ6S545 545 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 MTSS1LQ765P7 747 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 PDZD4Q76G19 769 aaPredicted RBP12.35□□□□□ -0.43
SPEN-205ENST00000487496 METTL23Q86XA0 190 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 NELFCDQ8IXH7 590 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 THEM5Q8N1Q8 247 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 ELMOD1Q8N336 334 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 ATAD1Q8NBU5 361 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 TCEAL4Q96EI5 215 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 MCRS1Q96EZ8 462 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 ZNF512Q96ME7 567 aaPredicted RBP12.35□□□□□ -0.43
SPEN-205ENST00000487496 ZNF560Q96MR9 790 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 MTMR12Q9C0I1 747 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 SCAND2PQ9GZW5 306 aaPredicted RBP12.35□□□□□ -0.43
SPEN-205ENST00000487496 MFSD1Q9H3U5 465 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 KIAA1586Q9HCI6 787 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 INTS13Q9NVM9 706 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 GDE1Q9NZC3 331 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 WNT16Q9UBV4 365 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 USP25Q9UHP3 1055 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 ITGA11Q9UKX5 1188 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 SLC27A5Q9Y2P5 690 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 YIPF1Q9Y548 306 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 SCN1AP35498 2009 aa12.35□□□□□ -0.43
SPEN-205ENST00000487496 NRG2O14511 850 aaPredicted RBP12.34□□□□□ -0.43
SPEN-205ENST00000487496 ZNF197O14709 1029 aa12.34□□□□□ -0.43
SPEN-205ENST00000487496 CLIC2O15247 247 aa12.34□□□□□ -0.43
SPEN-205ENST00000487496 KLRC4O43908 158 aa12.34□□□□□ -0.43
SPEN-205ENST00000487496 MICAL2O94851 1124 aa12.34□□□□□ -0.43
SPEN-205ENST00000487496 KRT19P08727 400 aa12.34□□□□□ -0.43
SPEN-205ENST00000487496 TMEM191BP0C7N4 346 aa12.34□□□□□ -0.43
SPEN-205ENST00000487496 NPR3P17342 541 aa12.34□□□□□ -0.43
SPEN-205ENST00000487496 CEBPBP17676 345 aa12.34□□□□□ -0.43
SPEN-205ENST00000487496 CCR2P41597 374 aa12.34□□□□□ -0.43
SPEN-205ENST00000487496 EPHA5P54756 1037 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms