RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.47	□□□□□ -0.25
SREBF1-215	ENST00000487401	ANO9	A1A5B4	782 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	NCAM2	O15394	837 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	GJA1	P17302	382 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	ADSS	P30520	456 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	TAF6	P49848	677 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	EPHA5	P54756	1037 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	ALCAM	Q13740	583 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	GRM2	Q14416	872 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	TEAD2	Q15562	447 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	POTEH	Q6S545	545 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	ZNF852	Q6ZMS4	543 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	TPRG1	Q6ZUI0	275 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	ATAD1	Q8NBU5	361 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	FAM200A	Q8TCP9	573 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	ZSWIM3	Q96MP5	696 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	ZNF396	Q96N95	335 aa	Predicted RBP	13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	NELL2	Q99435	816 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	PYM1	Q9BRP8	204 aa	Known RBP	13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	STRA6	Q9BX79	667 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	OSBPL6	Q9BZF3	934 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	LRRC27	Q9C0I9	530 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	IKZF4	Q9H2S9	585 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	PANK4	Q9NVE7	773 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	MRPS17	Q9Y2R5	130 aa	Known RBP	13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	ASB3	Q9Y575	518 aa		13.46	□□□□□ -0.25
SREBF1-215	ENST00000487401	PLXNA3	P51805	1871 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	MTMR11	A4FU01	709 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	LRRN2	O75325	713 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	MOSPD3	O75425	235 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	PPP1R37	O75864	691 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	VNN2	O95498	520 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	FGF19	O95750	216 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	LDHA	P00338	332 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	CYP11A1	P05108	521 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	GLUL	P15104	373 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	CD72	P21854	359 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	FCAR	P24071	287 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	GDI1	P31150	447 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	VIPR2	P41587	438 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	NASP	P49321	788 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	TUFM	P49411	452 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	TFAM	Q00059	246 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	KCNA1	Q09470	495 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	SLC39A12	Q504Y0	691 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	ITIH5	Q86UX2	942 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	NT5DC4	Q86YG4	428 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	CCDC65	Q8IXS2	484 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	PDILT	Q8N807	584 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	SHKBP1	Q8TBC3	707 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	NOC3L	Q8WTT2	800 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	CACTIN	Q8WUQ7	758 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	DNASE1L2	Q92874	299 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	IRF7	Q92985	503 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	E2F7	Q96AV8	911 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	TMEM209	Q96SK2	561 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	CRISPLD1	Q9H336	500 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	SEMA4A	Q9H3S1	761 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	TMEM206	Q9H813	350 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	LTB4R2	Q9NPC1	389 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	OLFML3	Q9NRN5	406 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	HEBP1	Q9NRV9	189 aa		13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	TFIP11	Q9UBB9	837 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	MTF2	Q9Y483	593 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	TDRD15	B5MCY1	1934 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-215	ENST00000487401	DENND4A	Q7Z401	1863 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401		A0A1W2PRU2	124 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	KPNA7	A9QM74	516 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	MAN2B1	O00754	1011 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	NRG2	O14511	850 aa	Predicted RBP	13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	ZNF263	O14978	683 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	SPTLC2	O15270	562 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	LAMTOR5	O43504	91 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	SP9	P0CG40	484 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	PSMC3	P17980	439 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	GART	P22102	1010 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	PNPLA4	P41247	253 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	MAGEA9	P43362	315 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	SMARCB1	Q12824	385 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	VEPH1	Q14D04	833 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	TAF12	Q16514	161 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	MGAT5B	Q3V5L5	792 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	SV2C	Q496J9	727 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	WSCD1	Q658N2	575 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	ZC3H14	Q6PJT7	736 aa	Known RBP	13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	STXBP4	Q6ZWJ1	553 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	YAF2	Q8IY57	180 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	ADSSL1	Q8N142	457 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	LINC00301	Q8NCQ3	95 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	OR10T2	Q8NGX3	314 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	DEPDC1B	Q8WUY9	529 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	SAAL1	Q96ER3	474 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	ZNF560	Q96MR9	790 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	SEPT5	Q99719	369 aa	Predicted RBP	13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	ZCWPW1	Q9H0M4	648 aa		13.44	□□□□□ -0.26
SREBF1-215	ENST00000487401	DNAJC25	Q9H1X3	360 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms