RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 KATNAL2Q8IYT4 538 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 UBR7Q8N806 425 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 TRIM7Q9C029 511 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 ELP3Q9H9T3 547 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 PRKCBP05771 671 aa27.7■■■□□ 2.02
HLA-C-208ENST00000487245 HARSP12081 509 aaKnown RBP27.7■■■□□ 2.02
HLA-C-208ENST00000487245 SLC26A2P50443 739 aa27.7■■■□□ 2.02
HLA-C-208ENST00000487245 ZNF132P52740 706 aa27.7■■■□□ 2.02
HLA-C-208ENST00000487245 MCL1Q07820 350 aa27.7■■■□□ 2.02
HLA-C-208ENST00000487245 SWT1Q5T5J6 900 aaKnown RBP27.7■■■□□ 2.02
HLA-C-208ENST00000487245 RELL1Q8IUW5 271 aa27.7■■■□□ 2.02
HLA-C-208ENST00000487245 HERPUD2Q9BSE4 406 aa27.7■■■□□ 2.02
HLA-C-208ENST00000487245 TRAIPQ9BWF2 469 aa27.7■■■□□ 2.02
HLA-C-208ENST00000487245 AGTPBP1Q9UPW5 1226 aa27.7■■■□□ 2.02
HLA-C-208ENST00000487245 OTOFQ9HC10 1997 aa27.7■■■□□ 2.02
HLA-C-208ENST00000487245 LOC102724159A0A0B4J2E5 919 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 SMIM23A6NLE4 172 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 NOP56O00567 594 aaKnown RBP27.69■■■□□ 2.02
HLA-C-208ENST00000487245 FAM189A1O60320 539 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 TTC4O95801 387 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 PPARDQ03181 441 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 PWP2Q15269 919 aaKnown RBP27.69■■■□□ 2.02
HLA-C-208ENST00000487245 DUOXA2Q1HG44 320 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 EXOC3L1Q86VI1 746 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 ANKRD13AQ8IZ07 590 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 OTUD5Q96G74 571 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 C11orf70Q9BRQ4 267 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 PARVAQ9NVD7 372 aa27.69■■■□□ 2.02
HLA-C-208ENST00000487245 ADM5C9JUS6 153 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 SOCS7O14512 581 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 ATF2P15336 505 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 MAMLD1Q13495 774 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 SNX1Q13596 522 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 SGSM1Q2NKQ1 1148 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 CCDC25Q86WR0 208 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 KCNH4Q9UQ05 1017 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 SPDYE5A6NIY4 337 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 DNM1LO00429 736 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 DDNO94850 711 aaPredicted RBP27.68■■■□□ 2.02
HLA-C-208ENST00000487245 LSM8O95777 96 aaKnown RBP27.68■■■□□ 2.02
HLA-C-208ENST00000487245 ITGA8P53708 1063 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 TFDP1Q14186 410 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 EEPD1Q7L9B9 569 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 ANKS4BQ8N8V4 417 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 EXD1Q8NHP7 514 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 UHMK1Q8TAS1 419 aaKnown RBP27.68■■■□□ 2.02
HLA-C-208ENST00000487245 CCDC114Q96M63 670 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 DDX23Q9BUQ8 820 aaKnown RBP27.68■■■□□ 2.02
HLA-C-208ENST00000487245 FOXP3Q9BZS1 431 aa27.68■■■□□ 2.02
HLA-C-208ENST00000487245 NSRP1Q9H0G5 558 aaKnown RBP27.68■■■□□ 2.02
HLA-C-208ENST00000487245 CCT8L1PA6NM43 557 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 NF2P35240 595 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 CHKAP35790 457 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 CETN2P41208 172 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 ZBTB33Q86T24 672 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 LRRC34Q8IZ02 419 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 RNF149Q8NC42 400 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 FEZF2Q8TBJ5 459 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 ZNF606Q8WXB4 792 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 IP6K2Q9UHH9 426 aa27.67■■■□□ 2.02
HLA-C-208ENST00000487245 CPSF3Q9UKF6 684 aaKnown RBP27.67■■■□□ 2.02
HLA-C-208ENST00000487245 DNAJC8O75937 253 aaPredicted RBP27.66■■■□□ 2.02
HLA-C-208ENST00000487245 CALB1P05937 261 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 SRGAP2CP0DJJ0 459 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 OSBPP22059 807 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 SLCO1A2P46721 670 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 MKRN4PQ13434 485 aaPredicted RBP27.66■■■□□ 2.02
HLA-C-208ENST00000487245 KCTD2Q14681 263 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 CEP128Q6ZU80 1094 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 PASD1Q8IV76 773 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 IPO4Q8TEX9 1081 aaKnown RBP27.66■■■□□ 2.02
HLA-C-208ENST00000487245 ATG4AQ8WYN0 398 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 ZNF518BQ9C0D4 1074 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 ANAPC5Q9UJX4 755 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 DNAJC25-GNG10A0A024R161 153 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 ARIH2O95376 493 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 TNFSF9P41273 254 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 SCTRP47872 440 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 PPIL2Q13356 520 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 SEZ6Q53EL9 994 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 DHX37Q8IY37 1157 aaKnown RBP27.66■■■□□ 2.02
HLA-C-208ENST00000487245 MMP19Q99542 508 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 PRMT1Q99873 361 aaKnown RBP27.66■■■□□ 2.02
HLA-C-208ENST00000487245 NIF3L1Q9GZT8 377 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 SMARCAD1Q9H4L7 1026 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 SLC40A1Q9NP59 571 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 LGALS13Q9UHV8 139 aa27.66■■■□□ 2.02
HLA-C-208ENST00000487245 R3HDM2Q9Y2K5 976 aaKnown RBP27.66■■■□□ 2.02
HLA-C-208ENST00000487245 CST3P01034 146 aaPredicted RBP27.65■■■□□ 2.02
HLA-C-208ENST00000487245 GSTA1P08263 222 aa27.65■■■□□ 2.02
HLA-C-208ENST00000487245 CFHP08603 1231 aa27.65■■■□□ 2.02
HLA-C-208ENST00000487245 RALAP11233 206 aa27.65■■■□□ 2.02
HLA-C-208ENST00000487245 YWHAEP62258 255 aaKnown RBP27.65■■■□□ 2.02
HLA-C-208ENST00000487245 TRPC3Q13507 836 aa27.65■■■□□ 2.02
HLA-C-208ENST00000487245 MPZL3Q6UWV2 235 aa27.65■■■□□ 2.02
HLA-C-208ENST00000487245 TSHZ1Q6ZSZ6 1077 aa27.65■■■□□ 2.02
HLA-C-208ENST00000487245 PHLDB2Q86SQ0 1253 aa27.65■■■□□ 2.02
HLA-C-208ENST00000487245 CCDC89Q8N998 374 aa27.65■■■□□ 2.02
HLA-C-208ENST00000487245 FGD4Q96M96 766 aa27.65■■■□□ 2.02
HLA-C-208ENST00000487245 SCLT1Q96NL6 688 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms