RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 RPL17P18621 184 aaKnown RBP14.14□□□□□ -0.15
NR1H3-223ENST00000486991 GBP2P32456 591 aaPredicted RBP14.14□□□□□ -0.15
NR1H3-223ENST00000486991 NBL1P41271 181 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 CASP4P49662 377 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 ACOT2P49753 483 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 CLCN5P51795 746 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 NUBP1P53384 320 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 OSTNP61366 133 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 DSG1Q02413 1049 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 HSP90AA2PQ14568 343 aaPredicted RBP14.14□□□□□ -0.15
NR1H3-223ENST00000486991 IQCB1Q15051 598 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 NFIL3Q16649 462 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 SEZ6Q53EL9 994 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 HSP90AA4PQ58FG1 418 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 GLRA4Q5JXX5 417 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 FUT10Q6P4F1 479 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 FOXR2Q6PJQ5 311 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 LUZP1Q86V48 1076 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 GAS2L3Q86XJ1 694 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 SLC9A9Q8IVB4 645 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 DHX40Q8IX18 779 aaKnown RBP14.14□□□□□ -0.15
NR1H3-223ENST00000486991 GPR65Q8IYL9 337 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 RDH13Q8NBN7 331 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 ZSWIM2Q8NEG5 633 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 ZMAT2Q96NC0 199 aaKnown RBP14.14□□□□□ -0.15
NR1H3-223ENST00000486991 FAM213AQ9BRX8 229 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 RXFP1Q9HBX9 757 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 DMAC2Q9NW81 257 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 ADAM28Q9UKQ2 775 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 FBXL21Q9UKT6 434 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 FRMD4BQ9Y2L6 1034 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 SMIM28A0A1B0GU29 152 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 KRBA1A5PL33 1030 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 IKBKBO14920 756 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 KIAA0391O15091 583 aaKnown RBP14.13□□□□□ -0.15
NR1H3-223ENST00000486991 EXTL3O43909 919 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 LDHAP00338 332 aaKnown RBP14.13□□□□□ -0.15
NR1H3-223ENST00000486991 THP07101 528 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 GLUD2P49448 558 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 YARSP54577 528 aaKnown RBP14.13□□□□□ -0.15
NR1H3-223ENST00000486991 CREMQ03060 361 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 MYBPC2Q14324 1141 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 NCAPHQ15003 741 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 RTP2Q5QGT7 225 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 ZBTB41Q5SVQ8 909 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 CREBRFQ8IUR6 639 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 ZC3H3Q8IXZ2 948 aaKnown RBP14.13□□□□□ -0.15
NR1H3-223ENST00000486991 C3orf58Q8NDZ4 430 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 ZNF707Q96C28 371 aaPredicted RBP14.13□□□□□ -0.15
NR1H3-223ENST00000486991 CEP63Q96MT8 703 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.13□□□□□ -0.15
NR1H3-223ENST00000486991 SAMSN1Q9NSI8 373 aaKnown RBP14.13□□□□□ -0.15
NR1H3-223ENST00000486991 FANCLQ9NW38 375 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 CNTN3Q9P232 1028 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 CA14Q9ULX7 337 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 DUSP12Q9UNI6 340 aa14.13□□□□□ -0.15
NR1H3-223ENST00000486991 STK25O00506 426 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 TADA2AO75478 443 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 AKAP3O75969 853 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 GLUD1P00367 558 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 C1RP00736 705 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 ADH1AP07327 375 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 EPB41P11171 864 aaKnown RBP14.12□□□□□ -0.15
NR1H3-223ENST00000486991 KCNE1P15382 129 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 AOC1P19801 751 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 PSMC2P35998 433 aaKnown RBP14.12□□□□□ -0.15
NR1H3-223ENST00000486991 TNFSF9P41273 254 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 TPM4P67936 248 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 ELAVL2Q12926 359 aaKnown RBP14.12□□□□□ -0.15
NR1H3-223ENST00000486991 KYAT1Q16773 422 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 USP41Q3LFD5 358 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 CCDC40Q4G0X9 1142 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 C15orf39Q6ZRI6 1047 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 FILIP1Q7Z7B0 1213 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 CBWD2Q8IUF1 395 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 FAM186BQ8IYM0 893 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 TMEM130Q8N3G9 435 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 DTWD2Q8NBA8 298 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 HASPINQ8TF76 798 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 SMG7Q92540 1137 aaKnown RBP14.12□□□□□ -0.15
NR1H3-223ENST00000486991 CCDC94Q9BW85 323 aaPredicted RBP14.12□□□□□ -0.15
NR1H3-223ENST00000486991 RBSNQ9H1K0 784 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 THAP9Q9H5L6 903 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 GOLGA2P5Q9HBQ8 144 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 KIAA1586Q9HCI6 787 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 WDR6Q9NNW5 1121 aaKnown RBP14.12□□□□□ -0.15
NR1H3-223ENST00000486991 TOPORSQ9NS56 1045 aaPredicted RBP14.12□□□□□ -0.15
NR1H3-223ENST00000486991 MAGEC2Q9UBF1 373 aaPredicted RBP14.12□□□□□ -0.15
NR1H3-223ENST00000486991 CLUHO75153 1309 aa14.12□□□□□ -0.15
NR1H3-223ENST00000486991 DMXL1Q9Y485 3027 aa14.11□□□□□ -0.15
NR1H3-223ENST00000486991 ZNF233A6NK53 670 aa14.11□□□□□ -0.15
NR1H3-223ENST00000486991 TMEM189-UBE2V1I3L0A0 370 aa14.11□□□□□ -0.15
NR1H3-223ENST00000486991 SLC16A3O15427 465 aaKnown RBP14.11□□□□□ -0.15
NR1H3-223ENST00000486991 TGM5O43548 720 aa14.11□□□□□ -0.15
NR1H3-223ENST00000486991 PAPLNO95428 1278 aa14.11□□□□□ -0.15
NR1H3-223ENST00000486991 ADRB2P07550 413 aa14.11□□□□□ -0.15
NR1H3-223ENST00000486991 CLTAP09496 248 aa14.11□□□□□ -0.15
NR1H3-223ENST00000486991 ANGPT1Q15389 498 aa14.11□□□□□ -0.15
NR1H3-223ENST00000486991 SNRNP35Q16560 246 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms