RNA–Protein interactions for RNA: ENST00000486967.5

FAM228B-204, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-204ENST00000486967 VPS52Q8N1B4 723 aa6.23□□□□□ -1.41
FAM228B-204ENST00000486967 SPATA5Q8NB90 893 aa6.23□□□□□ -1.41
FAM228B-204ENST00000486967 SPATA20Q8TB22 786 aa6.23□□□□□ -1.41
FAM228B-204ENST00000486967 SNRNP27Q8WVK2 155 aaKnown RBP6.23□□□□□ -1.41
FAM228B-204ENST00000486967 KCNB2Q92953 911 aa6.23□□□□□ -1.41
FAM228B-204ENST00000486967 ZNF707Q96C28 371 aaPredicted RBP6.23□□□□□ -1.41
FAM228B-204ENST00000486967 NUP88Q99567 741 aaPredicted RBP6.23□□□□□ -1.41
FAM228B-204ENST00000486967 KXD1Q9BQD3 176 aa6.23□□□□□ -1.41
FAM228B-204ENST00000486967 MAN1C1Q9NR34 630 aa6.23□□□□□ -1.41
FAM228B-204ENST00000486967 STARD5Q9NSY2 213 aa6.23□□□□□ -1.41
FAM228B-204ENST00000486967 CDH7Q9ULB5 785 aa6.23□□□□□ -1.41
FAM228B-204ENST00000486967 PA2G4Q9UQ80 394 aaKnown RBP6.23□□□□□ -1.41
FAM228B-204ENST00000486967 PHLPP2Q6ZVD8 1323 aa6.23□□□□□ -1.41
FAM228B-204ENST00000486967 FAM149AA5PLN7 773 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 SH3BP5O60239 455 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 LEFTY1O75610 366 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 EEF2P13639 858 aaKnown RBP6.22□□□□□ -1.41
FAM228B-204ENST00000486967 RPL17P18621 184 aaKnown RBP6.22□□□□□ -1.41
FAM228B-204ENST00000486967 ITIH2P19823 946 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 CD96P40200 585 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 RFX5P48382 616 aaPredicted RBP6.22□□□□□ -1.41
FAM228B-204ENST00000486967 SERPINB4P48594 390 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 ATXN3P54252 364 aaPredicted RBP6.22□□□□□ -1.41
FAM228B-204ENST00000486967 MGAT3Q09327 533 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 CCDC173Q0VFZ6 552 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 GRM2Q14416 872 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 CCDC27Q2M243 656 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 RABL6Q3YEC7 729 aaPredicted RBP6.22□□□□□ -1.41
FAM228B-204ENST00000486967 NAA16Q6N069 864 aaPredicted RBP6.22□□□□□ -1.41
FAM228B-204ENST00000486967 SLC23A3Q6PIS1 610 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 PI16Q6UXB8 463 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 CHST3Q7LGC8 479 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 SLC39A11Q8N1S5 342 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 NIF3L1Q9GZT8 377 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 AGO3Q9H9G7 860 aaKnown RBP6.22□□□□□ -1.41
FAM228B-204ENST00000486967 CPNE5Q9HCH3 593 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 RBM12Q9NTZ6 932 aaKnown RBP6.22□□□□□ -1.41
FAM228B-204ENST00000486967 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 DKK3Q9UBP4 350 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 ARHGEF17Q96PE2 2063 aaPredicted RBP6.22□□□□□ -1.41
FAM228B-204ENST00000486967 THADAQ6YHU6 1953 aa6.22□□□□□ -1.41
FAM228B-204ENST00000486967 EYA2O00167 538 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 PLK4O00444 970 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 DCLK1O15075 740 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 RFPL2O75678 378 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 ALDH1L1O75891 902 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 SMIM10L2AP0DMW4 78 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 SMIM10L2BP0DMW5 78 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 IBSPP21815 317 aaPredicted RBP6.21□□□□□ -1.42
FAM228B-204ENST00000486967 KLRC2P26717 231 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 CD52P31358 61 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 POLGP54098 1239 aaPredicted RBP6.21□□□□□ -1.42
FAM228B-204ENST00000486967 OXCT1P55809 520 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 PMS2CLQ68D20 193 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 NSMFQ6X4W1 530 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 AGMOQ6ZNB7 445 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 ADGRA1Q86SQ6 560 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 ZNF280BQ86YH2 543 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 TOP6BLQ8N6T0 577 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 SPATA3Q8NHX4 192 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 ASB11Q8WXH4 323 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 FGF11Q92914 225 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 HIC2Q96JB3 615 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 FAM84AQ96KN4 292 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 DMRTB1Q96MA1 342 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 RNPEPQ9H4A4 650 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 SNX11Q9Y5W9 270 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 DOCK6Q96HP0 2047 aa6.21□□□□□ -1.42
FAM228B-204ENST00000486967 COL4A2P08572 1712 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 GON4LQ3T8J9 2241 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 LRRC10BA6NIK2 292 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 EXTL3O43909 919 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 GNAT1P11488 350 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 ALAS1P13196 640 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 EDNRBP24530 442 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 GBP1P32455 592 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 AFMP43652 599 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 SLC14A1Q13336 389 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 IKZF1Q13422 519 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 LY6KQ17RY6 165 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 FBLN7Q53RD9 439 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 C2orf27AQ580R0 203 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 MUM1L1Q5H9M0 696 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 BROXQ5VW32 411 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 C1QL3Q5VWW1 255 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 LRRC55Q6ZSA7 311 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 ZSWIM9Q86XI8 627 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 SULF2Q8IWU5 870 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 EXD3Q8N9H8 876 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 PPTC7Q8NI37 304 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 EPS8L3Q8TE67 593 aaKnown RBP6.2□□□□□ -1.42
FAM228B-204ENST00000486967 PIGKQ92643 395 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 ISL2Q96A47 359 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 TMEM169Q96HH4 297 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 TMEM176AQ96HP8 235 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 DNAJC2Q99543 621 aaKnown RBP6.2□□□□□ -1.42
FAM228B-204ENST00000486967 EMILIN2Q9BXX0 1053 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 USP44Q9H0E7 712 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 GPRC5CQ9NQ84 441 aa6.2□□□□□ -1.42
FAM228B-204ENST00000486967 LRP2BPQ9P2M1 347 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms