RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ZNF558Q96NG5 402 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 ERGIC2Q96RQ1 377 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.221e-10■□□□□ 8.8
UBR4-214ENST00000486515 TMEM175Q9BSA9 504 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 OSBPL7Q9BZF2 842 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 PDCL3Q9H2J4 239 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 SNX25Q9H3E2 840 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 UBE2TQ9NPD8 197 aaPredicted RBP7.46□□□□□ -1.22
UBR4-214ENST00000486515 NXF1Q9UBU9 619 aaKnown RBP7.46□□□□□ -1.22
UBR4-214ENST00000486515 APEX2Q9UBZ4 518 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 PUF60Q9UHX1 559 aaKnown RBP7.46□□□□□ -1.22
UBR4-214ENST00000486515 MSRAQ9UJ68 235 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 DSEQ9UL01 958 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 ITIH6Q6UXX5 1313 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 EVPLQ92817 2033 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 KPNA7A9QM74 516 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 AKR1B15C9JRZ8 316 aaPredicted RBP7.45□□□□□ -1.22
UBR4-214ENST00000486515 TEX33O43247 280 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 DGKIO75912 1065 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 IPO7O95373 1038 aaKnown RBP7.45□□□□□ -1.22
UBR4-214ENST00000486515 GJB5O95377 273 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 ODC1P11926 461 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 KRT5P13647 590 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 SLC9A1P19634 815 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 PON1P27169 355 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 LRPAP1P30533 357 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 CA8P35219 290 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 STAT1P42224 750 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 CLCNKBP51801 687 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 BPIFB4P59827 614 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 MYL6P60660 151 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 POLR2FP61218 127 aaKnown RBP7.45□□□□□ -1.22
UBR4-214ENST00000486515 NOP14P78316 857 aaKnown RBP7.45□□□□□ -1.22
UBR4-214ENST00000486515 CCDC173Q0VFZ6 552 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 C9orf57Q5W0N0 161 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 KIAA1841Q6NSI8 718 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 HERC6Q8IVU3 1022 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 VSTM4Q8IW00 320 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 EFCAB13Q8IY85 973 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 THEM5Q8N1Q8 247 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 TAS1R2Q8TE23 839 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 ATOH1Q92858 354 aaPredicted RBP7.45□□□□□ -1.22
UBR4-214ENST00000486515 JAKMIP2Q96AA8 810 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 C18orf25Q96B23 403 aaPredicted RBP7.45□□□□□ -1.22
UBR4-214ENST00000486515 ZMAT2Q96NC0 199 aaKnown RBP7.45□□□□□ -1.22
UBR4-214ENST00000486515 CASD1Q96PB1 797 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 PPP1R10Q96QC0 940 aaKnown RBP7.45□□□□□ -1.22
UBR4-214ENST00000486515 EDEM3Q9BZQ6 932 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 NIF3L1Q9GZT8 377 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 HSD3B7Q9H2F3 369 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 DEF6Q9H4E7 631 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 CYP3A43Q9HB55 503 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 PLCB1Q9NQ66 1216 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 TBC1D13Q9NVG8 400 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 CEP72Q9P209 647 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 TUBGCP4Q9UGJ1 667 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 DNAJC12Q9UKB3 198 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 SSX2IPQ9Y2D8 614 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 PRG3Q9Y2Y8 225 aaPredicted RBP7.45□□□□□ -1.22
UBR4-214ENST00000486515 COQ4Q9Y3A0 265 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 SNX9Q9Y5X1 595 aa7.45□□□□□ -1.22
UBR4-214ENST00000486515 SF3B1O75533 1304 aaKnown RBP eCLIP7.45□□□□□ -1.224e-8■■■■■ 68.9
UBR4-214ENST00000486515 MYO15AQ9UKN7 3530 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 KAT6AQ92794 2004 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 FAM186AA6NE01 2351 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 LTBP2Q14767 1821 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 A0A1W2PQJ5 194 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 MEIS3P2A8K0S8 358 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 GRXCR1A8MXD5 290 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 PTGESO14684 152 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 INPPL1O15357 1258 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 STAU1O95793 577 aaKnown RBP7.44□□□□□ -1.22
UBR4-214ENST00000486515 CST3P01034 146 aaPredicted RBP7.44□□□□□ -1.22
UBR4-214ENST00000486515 UCHL3P15374 230 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 CD58P19256 250 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 LHX1P48742 406 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 SLC8A3P57103 927 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 DEFB103AP81534 67 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 GCNT1Q02742 428 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 PTK2Q05397 1052 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 CUL2Q13617 745 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 RAB30Q15771 203 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 ZBTB6Q15916 424 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 ARHGAP44Q17R89 818 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 EPC2Q52LR7 807 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 FIGNQ5HY92 759 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 CLLU1OSQ5K130 101 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 KLHDC7AQ5VTJ3 777 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 SFMBT2Q5VUG0 894 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 PDXDC1Q6P996 788 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 SCARA5Q6ZMJ2 495 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 RRAGAQ7L523 313 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 DPH6Q7L8W6 267 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 CEP57Q86XR8 500 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 TMEM86AQ8N2M4 240 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 OR6B3Q8NGW1 331 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 PLEKHO2Q8TD55 490 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 ZNF516Q92618 1163 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 TNIP3Q96KP6 325 aa7.44□□□□□ -1.22
UBR4-214ENST00000486515 SAMD11Q96NU1 681 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms