RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 MLLT1Q03111 559 aaPredicted RBP17.7■□□□□ 0.42
THBS3-207ENST00000486260 SOWAHAQ2M3V2 549 aa17.7■□□□□ 0.42
THBS3-207ENST00000486260 COLGALT1Q8NBJ5 622 aa17.7■□□□□ 0.42
THBS3-207ENST00000486260 BCL7CQ8WUZ0 217 aaPredicted RBP17.7■□□□□ 0.42
THBS3-207ENST00000486260 FAM81BQ96LP2 452 aa17.7■□□□□ 0.42
THBS3-207ENST00000486260 ZNF558Q96NG5 402 aa17.7■□□□□ 0.42
THBS3-207ENST00000486260 SPAG5Q96R06 1193 aa17.7■□□□□ 0.42
THBS3-207ENST00000486260 GPR88Q9GZN0 384 aa17.7■□□□□ 0.42
THBS3-207ENST00000486260 IMPACTQ9P2X3 320 aa17.7■□□□□ 0.42
THBS3-207ENST00000486260 LUC7L2Q9Y383 392 aaKnown RBP17.7■□□□□ 0.42
THBS3-207ENST00000486260 DAAM1Q9Y4D1 1078 aa17.7■□□□□ 0.42
THBS3-207ENST00000486260 FOXN3O00409 490 aaPredicted RBP17.69■□□□□ 0.42
THBS3-207ENST00000486260 HUS1O60921 280 aa17.69■□□□□ 0.42
THBS3-207ENST00000486260 CD58P19256 250 aa17.69■□□□□ 0.42
THBS3-207ENST00000486260 JAM2P57087 298 aa17.69■□□□□ 0.42
THBS3-207ENST00000486260 GPIHBP1Q8IV16 184 aa17.69■□□□□ 0.42
THBS3-207ENST00000486260 SUSD3Q96L08 255 aa17.69■□□□□ 0.42
THBS3-207ENST00000486260 MRPL45Q9BRJ2 306 aaKnown RBP17.69■□□□□ 0.42
THBS3-207ENST00000486260 CYP3A43Q9HB55 503 aa17.69■□□□□ 0.42
THBS3-207ENST00000486260 L1RE1Q9UN81 338 aa17.69■□□□□ 0.42
THBS3-207ENST00000486260 LRRC53A6NM62 1247 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 AKR1B15C9JRZ8 316 aaPredicted RBP17.68■□□□□ 0.42
THBS3-207ENST00000486260 F8VZ95 297 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 ACO1P21399 889 aaKnown RBP17.68■□□□□ 0.42
THBS3-207ENST00000486260 PAX3P23760 479 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 KRT9P35527 623 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 ZBED6P86452 979 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 SLC39A11Q8N1S5 342 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 APPL2Q8NEU8 664 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 ZNF397Q8NF99 534 aaPredicted RBP17.68■□□□□ 0.42
THBS3-207ENST00000486260 SHC3Q92529 594 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 CLP1Q92989 425 aaKnown RBP17.68■□□□□ 0.42
THBS3-207ENST00000486260 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 GPR62Q9BZJ7 368 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 CISHQ9NSE2 258 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 TIMM13Q9Y5L4 95 aaPredicted RBP17.68■□□□□ 0.42
THBS3-207ENST00000486260 PDE4DIPQ5VU43 2346 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 KIAA1671Q9BY89 1806 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 M0QZQ0 153 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 MFAP3LO75121 409 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 USP8P40818 1118 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 WSCD1Q658N2 575 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 PDXDC1Q6P996 788 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 LIMS2Q7Z4I7 341 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 TDHQ8IZJ6 230 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 PDCL2Q8N4E4 241 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 TOP6BLQ8N6T0 577 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 UBR7Q8N806 425 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 KBTBD7Q8WVZ9 684 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 IGSF21Q96ID5 467 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 AAASQ9NRG9 546 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 PCDHB4Q9Y5E5 795 aa17.68■□□□□ 0.42
THBS3-207ENST00000486260 LINC01553A4QN01 128 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 TRAPPC3O43617 180 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 ARHGEF15O94989 841 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 ODC1P11926 461 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 KRT5P13647 590 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 ARID5BQ14865 1188 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 CHRDL2Q6WN34 429 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 DPH6Q7L8W6 267 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 CCDC186Q7Z3E2 898 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 ADGRF2Q8IZF7 708 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 TC2NQ8N9U0 490 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 SPG21Q9NZD8 308 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 PCDHB12Q9Y5F1 795 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 GBF1Q92538 1859 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 SF3B1O75533 1304 aaKnown RBP eCLIP17.67■□□□□ 0.42
THBS3-207ENST00000486260 CHD9Q3L8U1 2897 aa17.67■□□□□ 0.42
THBS3-207ENST00000486260 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.66■□□□□ 0.42
THBS3-207ENST00000486260 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.66■□□□□ 0.42
THBS3-207ENST00000486260 GOLGA6L6A8MZA4 724 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 TACC1O75410 805 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 GFPT2O94808 682 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 CA3P07451 260 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 SOX5P35711 763 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 PBX2P40425 430 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 STAT1P42224 750 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 YWHAEP62258 255 aaKnown RBP17.66■□□□□ 0.42
THBS3-207ENST00000486260 CCDC173Q0VFZ6 552 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 ZNF394Q53GI3 561 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 FAM171A1Q5VUB5 890 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 TMEM270Q6UE05 265 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 TAS1R1Q7RTX1 841 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 CNGA4Q8IV77 575 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 OR6B3Q8NGW1 331 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 MYO6Q9UM54 1294 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 PCDHB8Q9UN66 801 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 YBX2Q9Y2T7 364 aaKnown RBP17.66■□□□□ 0.42
THBS3-207ENST00000486260 NME7Q9Y5B8 376 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 PCDHA11Q9Y5I1 949 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 LAMA3Q16787 3333 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 CARNS1A5YM72 827 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 TKTP29401 623 aaKnown RBP17.66■□□□□ 0.42
THBS3-207ENST00000486260 ARID5AQ03989 594 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 INCA1Q0VD86 236 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 E4F1Q66K89 784 aaPredicted RBP17.66■□□□□ 0.42
THBS3-207ENST00000486260 SPRED2Q7Z698 418 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 OSTM1Q86WC4 334 aa17.66■□□□□ 0.42
THBS3-207ENST00000486260 FAM71AQ8IYT1 594 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms