RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TCEAL4Q96EI5 215 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 MCRS1Q96EZ8 462 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 KMT5AQ9NQR1 393 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 DLGAP2Q9P1A6 1054 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 ARHGAP28Q9P2N2 729 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 MTRRQ9UBK8 725 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 WNT16Q9UBV4 365 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 ZMYM2Q9UBW7 1377 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 RWDD2AQ9UIY3 292 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 TNFSF13BQ9Y275 285 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 R4GN57 208 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 WDR27A2RRH5 827 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 PODXLO00592 558 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 NRDCO43847 1150 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 ZNF18P17022 549 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 PLCG1P19174 1290 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 MUTP22033 750 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 PROZP22891 400 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 GRM5P41594 1212 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 GUCY2FP51841 1108 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 EFNA5P52803 228 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 FANCCQ00597 558 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 CUL4BQ13620 913 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 PPP2R5AQ15172 486 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 SLC10A6Q3KNW5 377 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 DCAF4L1Q3SXM0 396 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 TMEM119Q4V9L6 283 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 ZBTB41Q5SVQ8 909 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 FOXR2Q6PJQ5 311 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 CYP26C1Q6V0L0 522 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 ERMP1Q7Z2K6 904 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 GRAMD1CQ8IYS0 662 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 NOC3LQ8WTT2 800 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 KIFAP3Q92845 792 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 ARHGEF3Q9NR81 526 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 TUBGCP4Q9UGJ1 667 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 DPP7Q9UHL4 492 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 CDH7Q9ULB5 785 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 DNM3Q9UQ16 869 aa10.19□□□□□ -0.78
TMEM39A-208ENST00000486159 PHLPP2Q6ZVD8 1323 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 MYH11P35749 1972 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 PPP1R3GB7ZBB8 358 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 TMEM189-UBE2V1I3L0A0 370 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 TBC1D4O60343 1298 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 SERPINC1P01008 464 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 GJA1P17302 382 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 CEBPBP17676 345 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 TNFSF9P41273 254 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 CCR2P41597 374 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 SLC12A3P55017 1021 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 UBASH3AP57075 661 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 ROR1Q01973 937 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 PSMD2Q13200 908 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 ARSHQ5FYA8 562 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 VARS2Q5ST30 1063 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 LIN9Q5TKA1 542 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 ISM2Q6H9L7 571 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 GPIHBP1Q8IV16 184 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 NPAS3Q8IXF0 933 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 MAML2Q8IZL2 1156 aaPredicted RBP10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 ADSSL1Q8N142 457 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 CCDC150Q8NCX0 1101 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 TMEM161BQ8NDZ6 487 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 ANKRD20A12PQ8NF67 263 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 LARP4BQ92615 738 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 RAD54LQ92698 747 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 DHTKD1Q96HY7 919 aaPredicted RBP10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 RTP3Q9BQQ7 232 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 TCHPQ9BT92 498 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 MRPL4Q9BYD3 311 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 HSD3B7Q9H2F3 369 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 TMEM134Q9H6X4 195 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 IGSF5Q9NSI5 407 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 NFE2L3Q9Y4A8 694 aa10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 TIMM13Q9Y5L4 95 aaPredicted RBP10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 PDCD11Q14690 1871 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-208ENST00000486159 CITO14578 2027 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 NCANO14594 1321 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 BICDL2A1A5D9 508 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 SHISA7A6NL88 538 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 PSMA7O14818 248 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 PPEF2O14830 753 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 VNN2O95498 520 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 C1RP00736 705 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 RHOP08100 348 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 HNRNPA1P09651 372 aaKnown RBP eCLIP10.17□□□□□ -0.783e-6■■■■□ 19.4
TMEM39A-208ENST00000486159 OR4Q2P0C623 313 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 MAPTP10636 758 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 CDK11BP21127 795 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 CREMQ03060 361 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 ELAVL2Q12926 359 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 PAK1Q13153 545 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 PABPC1LQ4VXU2 614 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 TANGO2Q6ICL3 276 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 ELMSAN1Q6PJG2 1045 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 MPZL3Q6UWV2 235 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms