RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 TLR3O15455 904 aaKnown RBP23.81■■□□□ 1.4
CLN5-202ENST00000485938 KRT10P13645 584 aa23.81■■□□□ 1.4
CLN5-202ENST00000485938 PECAM1P16284 738 aaPredicted RBP23.81■■□□□ 1.4
CLN5-202ENST00000485938 WNT7BP56706 349 aa23.81■■□□□ 1.4
CLN5-202ENST00000485938 PSMD6Q15008 389 aa23.81■■□□□ 1.4
CLN5-202ENST00000485938 ATP13A4Q4VNC1 1196 aa23.81■■□□□ 1.4
CLN5-202ENST00000485938 BICD1Q96G01 975 aa23.81■■□□□ 1.4
CLN5-202ENST00000485938 LRRC37BQ96QE4 947 aa23.81■■□□□ 1.4
CLN5-202ENST00000485938 TMEM39BQ9GZU3 492 aa23.81■■□□□ 1.4
CLN5-202ENST00000485938 SMG5Q9UPR3 1016 aaKnown RBP23.81■■□□□ 1.4
CLN5-202ENST00000485938 ZNF862O60290 1169 aa23.8■■□□□ 1.4
CLN5-202ENST00000485938 C4BPAP04003 597 aaKnown RBP23.8■■□□□ 1.4
CLN5-202ENST00000485938 SSTR3P32745 418 aaPredicted RBP23.8■■□□□ 1.4
CLN5-202ENST00000485938 PIK3CAP42336 1068 aa23.8■■□□□ 1.4
CLN5-202ENST00000485938 EAPPQ56P03 285 aaPredicted RBP23.8■■□□□ 1.4
CLN5-202ENST00000485938 ANKRD20A2Q5SQ80 823 aa23.8■■□□□ 1.4
CLN5-202ENST00000485938 ANKRD20A1Q5TYW2 823 aa23.8■■□□□ 1.4
CLN5-202ENST00000485938 ANKRD20A3Q5VUR7 823 aa23.8■■□□□ 1.4
CLN5-202ENST00000485938 DRICH1Q6PGQ1 229 aaPredicted RBP23.8■■□□□ 1.4
CLN5-202ENST00000485938 FAXDC2Q96IV6 333 aa23.8■■□□□ 1.4
CLN5-202ENST00000485938 EXTL3O43909 919 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 EDF1O60869 148 aaKnown RBP23.79■■□□□ 1.4
CLN5-202ENST00000485938 VNN1O95497 513 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 RPA3P35244 121 aaPredicted RBP23.79■■□□□ 1.4
CLN5-202ENST00000485938 CETN2P41208 172 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 DLGAP5Q15398 846 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 SPDYE2Q495Y8 402 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 RCOR2Q8IZ40 523 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 AGGF1Q8N302 714 aaeCLIP23.79■■□□□ 1.4
CLN5-202ENST00000485938 ALLCQ8N6M5 410 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 SLITRK1Q96PX8 696 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 PDCD2LQ9BRP1 358 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 ZNF341Q9BYN7 854 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 MAP3K20Q9NYL2 800 aaKnown RBP23.79■■□□□ 1.4
CLN5-202ENST00000485938 SENP1Q9P0U3 644 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 ZNF148Q9UQR1 794 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 STBD1O95210 358 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 TCF4P15884 667 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 KRT15P19012 456 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 TNNI1P19237 187 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 GNA15P30679 374 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 ARSEP51690 589 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 C1QBPQ07021 282 aaKnown RBP23.79■■□□□ 1.4
CLN5-202ENST00000485938 CUL2Q13617 745 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 HP1BP3Q5SSJ5 553 aaPredicted RBP23.79■■□□□ 1.4
CLN5-202ENST00000485938 KAZNQ674X7 775 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 C4orf33Q8N1A6 199 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 RDM1Q8NG50 284 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 FEZF2Q8TBJ5 459 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 SMC6Q96SB8 1091 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 RMDN3Q96TC7 470 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 PCDHB4Q9Y5E5 795 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 PCDHA10Q9Y5I2 948 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 PTPRJQ12913 1337 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 WDR81Q562E7 1941 aa23.79■■□□□ 1.4
CLN5-202ENST00000485938 TESPA1A2RU30 521 aaPredicted RBP23.78■■□□□ 1.4
CLN5-202ENST00000485938 ETS1P14921 441 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 TARSP26639 723 aaKnown RBP23.78■■□□□ 1.4
CLN5-202ENST00000485938 PSEN1P49768 467 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 GPS1Q13098 491 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 TMEM270Q6UE05 265 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 RBM41Q96IZ5 413 aaKnown RBP23.78■■□□□ 1.4
CLN5-202ENST00000485938 TMEM237Q96Q45 408 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 FNBP1Q96RU3 617 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 SENP7Q9BQF6 1050 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 SLC38A10Q9HBR0 1119 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 APOBEC3GQ9HC16 384 aaKnown RBP23.78■■□□□ 1.4
CLN5-202ENST00000485938 PDLIM7Q9NR12 457 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 PXMP2Q9NR77 195 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 ARHGAP28Q9P2N2 729 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 DCTN3O75935 186 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 SLC1A5Q15758 541 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 MFSD7Q6UXD7 560 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 INPP5DQ92835 1189 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 KIAA1683Q9H0B3 1180 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 XPNPEP1Q9NQW7 623 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 PARVAQ9NVD7 372 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 GABBR1Q9UBS5 961 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 IP6K2Q9UHH9 426 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 HAO1Q9UJM8 370 aa23.78■■□□□ 1.4
CLN5-202ENST00000485938 ALOX15BO15296 676 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 ASNSP08243 561 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 RTP1P59025 263 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 MORF4L2Q15014 288 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 ARID2Q68CP9 1835 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 LRRC8CQ8TDW0 803 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 C10orf82Q8WW14 230 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 TRIM6Q9C030 488 aaPredicted RBP23.77■■□□□ 1.4
CLN5-202ENST00000485938 VPS37BQ9H9H4 285 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 NKX1-2Q9UD57 310 aaPredicted RBP23.77■■□□□ 1.4
CLN5-202ENST00000485938 TYROBPO43914 113 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 TJP3O95049 919 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 T-ENOLP0DO92 83 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 ATF7P17544 494 aaPredicted RBP23.77■■□□□ 1.4
CLN5-202ENST00000485938 ALDH3A1P30838 453 aa23.77■■□□□ 1.4
CLN5-202ENST00000485938 RPL7AP62424 266 aaKnown RBP23.77■■□□□ 1.4
CLN5-202ENST00000485938 RSBN1LQ6PCB5 846 aaPredicted RBP23.77■■□□□ 1.4
CLN5-202ENST00000485938 KRT1P04264 644 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 CA4P22748 312 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 NLRP11P59045 1033 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms