RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 COLGALT2Q8IYK4 626 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 RPUSD2Q8IZ73 545 aaKnown RBP12.13□□□□□ -0.47
SND1-212ENST00000485871 C3orf58Q8NDZ4 430 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 ZNF397Q8NF99 534 aaPredicted RBP12.13□□□□□ -0.47
SND1-212ENST00000485871 BADQ92934 168 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 SPAG5Q96R06 1193 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 CDX2Q99626 313 aaPredicted RBP12.13□□□□□ -0.47
SND1-212ENST00000485871 PAAF1Q9BRP4 392 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 IMPG2Q9BZV3 1241 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 TBC1D13Q9NVG8 400 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 INPP5FQ9Y2H2 1132 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 PCDHB7Q9Y5E2 793 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 EFCAB14O75071 495 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 GFPT2O94808 682 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 BAIAP3O94812 1187 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 PLEKP08567 350 aaPredicted RBP12.12□□□□□ -0.47
SND1-212ENST00000485871 IBSPP21815 317 aaPredicted RBP12.12□□□□□ -0.47
SND1-212ENST00000485871 RPL9P32969 192 aaKnown RBP12.12□□□□□ -0.47
SND1-212ENST00000485871 STAT1P42224 750 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 AARSP49588 968 aaKnown RBP eCLIP12.12□□□□□ -0.47
SND1-212ENST00000485871 CLCNKBP51801 687 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 ZNF132P52740 706 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 WDR5P61964 334 aaKnown RBP12.12□□□□□ -0.47
SND1-212ENST00000485871 MAPK8IP2Q13387 824 aaPredicted RBP12.12□□□□□ -0.47
SND1-212ENST00000485871 UPP1Q16831 310 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 ZNF280BQ86YH2 543 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 TMTC1Q8IUR5 882 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 GPIHBP1Q8IV16 184 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 RSPH1Q8WYR4 309 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 TOP1MTQ969P6 601 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 PPP1R13BQ96KQ4 1090 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 SMYD3Q9H7B4 428 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 KANSL3Q9P2N6 904 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 NME7Q9Y5B8 376 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 GBF1Q92538 1859 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 VCANP13611 3396 aa12.12□□□□□ -0.47
SND1-212ENST00000485871 SSU72P8A0A1W2PR75 194 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 CASTOR2A6NHX0 329 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 SOWAHDA6NJG2 315 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 TMEM189-UBE2V1I3L0A0 370 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 PODXLO00592 558 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 HOXA2O43364 376 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 DGKIO75912 1065 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 SERPING1P05155 500 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 FERP16591 822 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 PNPLA4P41247 253 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 RAP1GAPP47736 663 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 TAF6P49848 677 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 LILRA4P59901 499 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 FPGSQ05932 587 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 INCA1Q0VD86 236 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 PPIGQ13427 754 aaKnown RBP eCLIP12.11□□□□□ -0.47
SND1-212ENST00000485871 MTF1Q14872 753 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 ASIC2Q16515 512 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 TSR1Q2NL82 804 aaKnown RBP12.11□□□□□ -0.47
SND1-212ENST00000485871 WDR72Q3MJ13 1102 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 TMEM240Q5SV17 173 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 URGCPQ8TCY9 931 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 EPS8L1Q8TE68 723 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 ZNF689Q96CS4 500 aaPredicted RBP12.11□□□□□ -0.47
SND1-212ENST00000485871 ZNF560Q96MR9 790 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 UROC1Q96N76 676 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 FAM124BQ9H5Z6 455 aaPredicted RBP12.11□□□□□ -0.47
SND1-212ENST00000485871 NRDE2Q9H7Z3 1164 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 CYP3A43Q9HB55 503 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 HCSTQ9UBK5 93 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 NXF1Q9UBU9 619 aaKnown RBP12.11□□□□□ -0.47
SND1-212ENST00000485871 NENFQ9UMX5 172 aa12.11□□□□□ -0.47
SND1-212ENST00000485871 NLRC5Q86WI3 1866 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 PTPRDP23468 1912 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 CYP26A1O43174 497 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 WEE2P0C1S8 567 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 CCDC175P0C221 793 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 CDH8P55286 799 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 PTK2Q05397 1052 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 MYO1EQ12965 1108 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 SOWAHAQ2M3V2 549 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 SV2CQ496J9 727 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 CYP26C1Q6V0L0 522 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 SCARA5Q6ZMJ2 495 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 ZNF365Q70YC5 407 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 KBTBD7Q8WVZ9 684 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
SND1-212ENST00000485871 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
SND1-212ENST00000485871 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.1□□□□□ -0.475e-8■■■■□ 21.4
SND1-212ENST00000485871 ACP6Q9NPH0 428 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 CISHQ9NSE2 258 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
SND1-212ENST00000485871 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 PRKAG2Q9UGJ0 569 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 NOCTQ9UK39 431 aaKnown RBP12.1□□□□□ -0.47
SND1-212ENST00000485871 LRFN2Q9ULH4 789 aa12.1□□□□□ -0.47
SND1-212ENST00000485871 F8W810 466 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 ZNF263O14978 683 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 CILPO75339 1184 aa12.09□□□□□ -0.47
SND1-212ENST00000485871 TACC1O75410 805 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms