RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 KAT5Q92993 513 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 TMEM169Q96HH4 297 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 KREMEN1Q96MU8 473 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 ARID3AQ99856 593 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 GPR62Q9BZJ7 368 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 SDCBP2Q9H190 292 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 SMYD3Q9H7B4 428 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 CYP3A43Q9HB55 503 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 AJAP1Q9UKB5 411 aaPredicted RBP18.83■□□□□ 0.6
CHMP3-207ENST00000485465 PCDHB8Q9UN66 801 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 L1RE1Q9UN81 338 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.83■□□□□ 0.6
CHMP3-207ENST00000485465 FHOD1Q9Y613 1164 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 A0A1W2PPC1 479 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 ARHGEF37A1IGU5 675 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 WEE2P0C1S8 567 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 FAM163BP0C2L3 166 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 ODC1P11926 461 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 CDH8P55286 799 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 SMAD3P84022 425 aaKnown RBP18.82■□□□□ 0.6
CHMP3-207ENST00000485465 TAP1Q03518 808 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 ELAVL2Q12926 359 aaKnown RBP18.82■□□□□ 0.6
CHMP3-207ENST00000485465 PDCL2Q8N4E4 241 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 JAKMIP2Q96AA8 810 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 IQCDQ96DY2 449 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 SAMD11Q96NU1 681 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 C17orf80Q9BSJ5 609 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 PLVAPQ9BX97 442 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 TTYH3Q9C0H2 523 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 NKX2-4Q9H2Z4 354 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 CEP72Q9P209 647 aa18.82■□□□□ 0.6
CHMP3-207ENST00000485465 TACC1O75410 805 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 FGF18O76093 207 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 CYP11A1P05108 521 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 TYMPP19971 482 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 RAP1GAPP47736 663 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 ERVK-21P61565 698 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 PLCB3Q01970 1234 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 KRT17Q04695 432 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 ARHGAP44Q17R89 818 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 FAM171A1Q5VUB5 890 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 WSCD1Q658N2 575 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 TAS1R1Q7RTX1 841 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.81■□□□□ 0.6
CHMP3-207ENST00000485465 DDX53Q86TM3 631 aaKnown RBP18.81■□□□□ 0.6
CHMP3-207ENST00000485465 RNF168Q8IYW5 571 aaPredicted RBP18.81■□□□□ 0.6
CHMP3-207ENST00000485465 TMEM86AQ8N2M4 240 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 KLHL23Q8NBE8 558 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 TGS1Q96RS0 853 aaKnown RBP18.81■□□□□ 0.6
CHMP3-207ENST00000485465 MRPL45Q9BRJ2 306 aaKnown RBP18.81■□□□□ 0.6
CHMP3-207ENST00000485465 VN1R3Q9BXE9 311 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 STK33Q9BYT3 514 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 EDEM3Q9BZQ6 932 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 NLRC4Q9NPP4 1024 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 DSEQ9UL01 958 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 COLQQ9Y215 455 aaPredicted RBP18.81■□□□□ 0.6
CHMP3-207ENST00000485465 TIMM13Q9Y5L4 95 aaPredicted RBP18.81■□□□□ 0.6
CHMP3-207ENST00000485465 KIAA1671Q9BY89 1806 aa18.81■□□□□ 0.6
CHMP3-207ENST00000485465 PDE4DIPQ5VU43 2346 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 A0A1W2PQJ5 194 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 C5orf67F2Z3F1 127 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 SYN3O14994 580 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 RB1P06400 928 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 ACO1P21399 889 aaKnown RBP18.8■□□□□ 0.6
CHMP3-207ENST00000485465 FGFR3P22607 806 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 TKTP29401 623 aaKnown RBP18.8■□□□□ 0.6
CHMP3-207ENST00000485465 YWHAEP62258 255 aaKnown RBP18.8■□□□□ 0.6
CHMP3-207ENST00000485465 TBX2Q13207 712 aaPredicted RBP18.8■□□□□ 0.6
CHMP3-207ENST00000485465 RAPGEF1Q13905 1077 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 TRIM14Q14142 442 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 DRAP1Q14919 205 aaPredicted RBP18.8■□□□□ 0.6
CHMP3-207ENST00000485465 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.8■□□□□ 0.6
CHMP3-207ENST00000485465 CACNA2D4Q7Z3S7 1137 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 SPRED2Q7Z698 418 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 PPFIBP1Q86W92 1011 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 DRC7Q8IY82 874 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 ADGRF2Q8IZF7 708 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 UBR7Q8N806 425 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 KBTBD7Q8WVZ9 684 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 FAM124BQ9H5Z6 455 aaPredicted RBP18.8■□□□□ 0.6
CHMP3-207ENST00000485465 CISHQ9NSE2 258 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 STK39Q9UEW8 545 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 GBF1Q92538 1859 aa18.8■□□□□ 0.6
CHMP3-207ENST00000485465 SOD2P04179 222 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 GYPCP04921 128 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 CD58P19256 250 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 WARSP23381 471 aaKnown RBP18.79■□□□□ 0.6
CHMP3-207ENST00000485465 DNAJB2P25686 324 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 JAM2P57087 298 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 LRIT3Q3SXY7 679 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 PRPF38BQ5VTL8 546 aaKnown RBP18.79■□□□□ 0.6
CHMP3-207ENST00000485465 PPP2R2DQ66LE6 453 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 OSTM1Q86WC4 334 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 METTL23Q86XA0 190 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 TTC39CQ8N584 583 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 SPATA18Q8TC71 538 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 CPLX3Q8WVH0 158 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 SHC3Q92529 594 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 BAP1Q92560 729 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 ANP32BQ92688 251 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms