RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 TMEM259Q4ZIN3 620 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 CBWD3Q5JTY5 395 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 CBWD5Q5RIA9 395 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 NXNQ6DKJ4 435 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 XRRA1Q6P2D8 792 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 GJB7Q6PEY0 223 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 RASGEF1CQ8N431 466 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 GDAP1Q8TB36 358 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 TRPM4Q8TD43 1214 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 RFFLQ8WZ73 363 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 TCF12Q99081 682 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 NELL2Q99435 816 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 KRT12Q99456 494 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 SYT11Q9BT88 431 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 EPB41L5Q9HCM4 733 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 FKBP14Q9NWM8 211 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 PACSIN2Q9UNF0 486 aaPredicted RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 STXBP5LQ9Y2K9 1186 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 ZHX2Q9Y6X8 837 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 GBP2P32456 591 aaPredicted RBP9.78□□□□□ -0.84
USP16-206ENST00000485067 RARRES1P49788 294 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 GALCP54803 685 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 PRKG1Q13976 671 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 PPP2R5EQ16537 467 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 ARMC4Q5T2S8 1044 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 CHADLQ6NUI6 762 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 C4orf19Q8IY42 314 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 RDM1Q8NG50 284 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 MAGEC3Q8TD91 643 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 TRPC4APQ8TEL6 797 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 ARHGEF2Q92974 986 aaKnown RBP9.78□□□□□ -0.84
USP16-206ENST00000485067 HES6Q96HZ4 224 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 CCDC43Q96MW1 224 aaKnown RBP9.78□□□□□ -0.84
USP16-206ENST00000485067 TSC22D3Q99576 134 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 GPR88Q9GZN0 384 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 PLEKHA5Q9HAU0 1116 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 GALNT8Q9NY28 637 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 AMFRQ9UKV5 643 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 TTC7AQ9ULT0 858 aaPredicted RBP9.78□□□□□ -0.84
USP16-206ENST00000485067 USP20Q9Y2K6 914 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 TELO2Q9Y4R8 837 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 SAMM50Q9Y512 469 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 RIPK3Q9Y572 518 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 PPP2R3BQ9Y5P8 575 aa9.78□□□□□ -0.84
USP16-206ENST00000485067 CTNND1O60716 968 aaKnown RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 SHOX2O60902 331 aaPredicted RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 ZBTB48P10074 688 aaPredicted RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 TNFAIP3P21580 790 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 HPDP32754 393 aaPredicted RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 LIG3P49916 1009 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 DNA2P51530 1060 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 VAMP7P51809 220 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 GTF2BQ00403 316 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 SPP2Q13103 211 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 SP140Q13342 867 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 ITGB3BPQ13352 177 aaPredicted RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 ITGA7Q13683 1181 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 TUBA3CQ13748 450 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 TAF1CQ15572 869 aaPredicted RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 MAEAQ7L5Y9 396 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 NT5DC3Q86UY8 548 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 XXYLT1Q8NBI6 393 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 LNX1Q8TBB1 728 aaPredicted RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 SYTL5Q8TDW5 730 aaPredicted RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 RSAD2Q8WXG1 361 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 MAELQ96JY0 434 aaKnown RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 FNBP1Q96RU3 617 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 MTFR1LQ9H019 292 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 ISCUQ9H1K1 167 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 TAF1DQ9H5J8 278 aaPredicted RBP9.77□□□□□ -0.84
USP16-206ENST00000485067 SLITRK6Q9H5Y7 841 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 ANKEF1Q9NU02 776 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 IL20Q9NYY1 176 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 RIMKLBQ9ULI2 386 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 EXOC7Q9UPT5 735 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 EFR3BQ9Y2G0 817 aa9.77□□□□□ -0.84
USP16-206ENST00000485067 MYPNQ86TC9 1320 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 PARP14Q460N5 1801 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 POLR2AP24928 1970 aaKnown RBP9.77□□□□□ -0.85
USP16-206ENST00000485067 FAM170AA1A519 330 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 LIN7AO14910 233 aaPredicted RBP9.77□□□□□ -0.85
USP16-206ENST00000485067 TMCC1O94876 653 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 TRIM49P0CI25 452 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 TRIM49CP0CI26 452 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 ATF7P17544 494 aaPredicted RBP9.77□□□□□ -0.85
USP16-206ENST00000485067 EIF2AK2P19525 551 aaKnown RBP9.77□□□□□ -0.85
USP16-206ENST00000485067 VAMP1P23763 118 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 WEE1P30291 646 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 YWHABP31946 246 aaKnown RBP9.77□□□□□ -0.85
USP16-206ENST00000485067 CARSP49589 748 aaKnown RBP9.77□□□□□ -0.85
USP16-206ENST00000485067 HADHBP55084 474 aaKnown RBP9.77□□□□□ -0.85
USP16-206ENST00000485067 PSMC5P62195 406 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 MRPS9P82933 396 aaKnown RBP9.77□□□□□ -0.85
USP16-206ENST00000485067 KRT76Q01546 638 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 Q3C1V9 767 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 CCDC38Q502W7 563 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 ANGEL2Q5VTE6 544 aaKnown RBP9.77□□□□□ -0.85
USP16-206ENST00000485067 TMEM53Q6P2H8 277 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 FOXR1Q6PIV2 292 aa9.77□□□□□ -0.85
USP16-206ENST00000485067 MAATS1Q7Z4T9 603 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms