RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 CXCL9Q07325 125 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 SAFBQ15424 915 aaKnown RBP eCLIP4.92□□□□□ -1.62
SPTA1-206ENST00000484520 SEC23AQ15436 765 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 CFAP100Q494V2 611 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 BTBD8Q5XKL5 378 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 GALNT17Q6IS24 598 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 OLFM4Q6UX06 510 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 TMEM179Q6ZVK1 233 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 BRAPQ7Z569 592 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 MRGPRGQ86SM5 289 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 APOBEC3FQ8IUX4 373 aaKnown RBP4.92□□□□□ -1.62
SPTA1-206ENST00000484520 MAPKAPK5Q8IW41 473 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 ZNF713Q8N859 430 aaPredicted RBP4.92□□□□□ -1.62
SPTA1-206ENST00000484520 ENAHQ8N8S7 591 aaPredicted RBP4.92□□□□□ -1.62
SPTA1-206ENST00000484520 FANCBQ8NB91 859 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 NSUN7Q8NE18 718 aaKnown RBP4.92□□□□□ -1.62
SPTA1-206ENST00000484520 CCDC12Q8WUD4 166 aaPredicted RBP4.92□□□□□ -1.62
SPTA1-206ENST00000484520 FAM151AQ8WW52 585 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 CLIP3Q96DZ5 547 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 RNF26Q9BY78 433 aaPredicted RBP4.92□□□□□ -1.62
SPTA1-206ENST00000484520 ZNF703Q9H7S9 590 aaPredicted RBP4.92□□□□□ -1.62
SPTA1-206ENST00000484520 CCSER2Q9H7U1 834 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 IPPKQ9H8X2 491 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 PLA2G3Q9NZ20 509 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 ARHGAP28Q9P2N2 729 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 CFAP45Q9UL16 551 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 PNMA2Q9UL42 364 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 NAP1L2Q9ULW6 460 aaPredicted RBP4.92□□□□□ -1.62
SPTA1-206ENST00000484520 DMRT1Q9Y5R6 373 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 TNFRSF18Q9Y5U5 241 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 LAMA4Q16363 1823 aa4.92□□□□□ -1.62
SPTA1-206ENST00000484520 SLX4Q8IY92 1834 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 FAM47E-STBD1D6RA91 191 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 TTLL1O95922 423 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 CPA1P15085 419 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 CALML3P27482 149 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 DNAJA1P31689 397 aaKnown RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 PRELPP51888 382 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 GPR85P60893 370 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 KRT85P78386 507 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 SSRP1Q08945 709 aaKnown RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 NTRK3Q16288 839 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 ASPRV1Q53RT3 343 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 GPATCH4Q5T3I0 446 aaKnown RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 USP30Q70CQ3 517 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 NOL8Q76FK4 1167 aaKnown RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 CYB5R4Q7L1T6 521 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 MICU3Q86XE3 530 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 NECAB1Q8N987 351 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 TNPO1Q92973 898 aaKnown RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 SYAP1Q96A49 352 aaPredicted RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 ZBED3Q96IU2 234 aaPredicted RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 C8orf76Q96K31 380 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 ZFYVE21Q9BQ24 234 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 GLT8D2Q9H1C3 349 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 KANSL2Q9H9L4 492 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 CABP5Q9NP86 173 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 MYOZ2Q9NPC6 264 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 SH3GLB2Q9NR46 395 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 RIC8BQ9NVN3 520 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 CEP72Q9P209 647 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 ORC3Q9UBD5 711 aaPredicted RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 ISY1Q9ULR0 285 aaKnown RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 REXO2Q9Y3B8 237 aaKnown RBP4.91□□□□□ -1.62
SPTA1-206ENST00000484520 CHD4Q14839 1912 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 ELP1O95163 1332 aa4.91□□□□□ -1.62
SPTA1-206ENST00000484520 MYH13Q9UKX3 1938 aa4.9□□□□□ -1.62
SPTA1-206ENST00000484520 BLACEA4D250 179 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 VPS37CA5D8V6 355 aaPredicted RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 IQCA1LA6NCM1 817 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 FAM90A27PA6NNH2 459 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 PRODHO43272 600 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 PRPF3O43395 683 aaKnown RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 BAG4O95429 457 aaKnown RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 BMP15O95972 392 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 PARP1P09874 1014 aaKnown RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 PLCD1P51178 756 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 IL13RA1P78552 427 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 TROAPQ12815 778 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 STK3Q13188 491 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 PICALMQ13492 652 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 HSP90AA2PQ14568 343 aaPredicted RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 GRM7Q14831 915 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 GRM4Q14833 912 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 CERKLQ49MI3 558 aaPredicted RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 TATDN1Q6P1N9 297 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 PCSK4Q6UW60 755 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 TMTC3Q6ZXV5 915 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 GMCL1P1Q8NEA9 526 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 CCDC148Q8NFR7 591 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 FBXO18Q8NFZ0 1043 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 TCEANC2Q96MN5 208 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 ZNF396Q96N95 335 aaPredicted RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 SPZ1Q9BXG8 430 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 LRRC2Q9BYS8 371 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 CAPN10Q9HC96 672 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 NMRK2Q9NPI5 230 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 SLC2A4RGQ9NR83 387 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 AURKAIP1Q9NWT8 199 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms