RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 EXOC3L4Q17RC7 722 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 TIGD5Q53EQ6 642 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 TJAP1Q5JTD0 557 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 SLC27A1Q6PCB7 646 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 RAD9BQ6WBX8 426 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 SYT10Q6XYQ8 523 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 GBP6Q6ZN66 633 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 TAS1R1Q7RTX1 841 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 HAUS6Q7Z4H7 955 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 MRPL10Q7Z7H8 261 aaKnown RBP7.48□□□□□ -1.21
BRCA1-216ENST00000484087 USP37Q86T82 979 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 FMNL3Q8IVF7 1028 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 REXO1L1PQ8IX06 675 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-216ENST00000484087 ADAMTS19Q8TE59 1207 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 SPIRE2Q8WWL2 714 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 CCDC42Q96M95 316 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 DESI2Q9BSY9 194 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 TRAIPQ9BWF2 469 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 LSM14BQ9BX40 385 aaKnown RBP7.48□□□□□ -1.21
BRCA1-216ENST00000484087 PLVAPQ9BX97 442 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 NFKBIZQ9BYH8 718 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 TTYH3Q9C0H2 523 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 HAPLN2Q9GZV7 340 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 LUC7LQ9NQ29 371 aaKnown RBP7.48□□□□□ -1.21
BRCA1-216ENST00000484087 TLR9Q9NR96 1032 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 AGPAT3Q9NRZ7 376 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 PRMT7Q9NVM4 692 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-216ENST00000484087 ANKFY1Q9P2R3 1169 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 DNAI1Q9UI46 699 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 RWDD3Q9Y3V2 267 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 DAAM1Q9Y4D1 1078 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 ADGRG1Q9Y653 693 aa7.48□□□□□ -1.21
BRCA1-216ENST00000484087 EPN1Q9Y6I3 576 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-216ENST00000484087 GTPBP10A4D1E9 387 aaKnown RBP7.47□□□□□ -1.21
BRCA1-216ENST00000484087 ACKR2O00590 384 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 C2CD2LO14523 706 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 DYNC1I1O14576 645 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 ABLIM1O14639 778 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 PTGESO14684 152 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 NRP1O14786 923 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 FSCN2O14926 492 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 HOXA2O43364 376 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 AKR1B10O60218 316 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 N4BP1O75113 896 aaKnown RBP7.47□□□□□ -1.21
BRCA1-216ENST00000484087 ZNF623O75123 536 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 NDUFA10O95299 355 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 GALTP07902 379 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 WEE2P0C1S8 567 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 BMP1P13497 986 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 SP100P23497 879 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-216ENST00000484087 HNRNPH3P31942 346 aaKnown RBP7.47□□□□□ -1.21
BRCA1-216ENST00000484087 KLK7P49862 253 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 CYP2J2P51589 502 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 GNG11P61952 73 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 MRPS5P82675 430 aaKnown RBP7.47□□□□□ -1.21
BRCA1-216ENST00000484087 KCNA1Q09470 495 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 ZNF568Q3ZCX4 644 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 ZBTB41Q5SVQ8 909 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 ATF7IP2Q5U623 682 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 SFMBT2Q5VUG0 894 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 INTS8Q75QN2 995 aaKnown RBP7.47□□□□□ -1.21
BRCA1-216ENST00000484087 RRAGAQ7L523 313 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 KIAA1328Q86T90 577 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 GLYCTKQ8IVS8 523 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 C12orf56Q8IXR9 622 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 COLGALT2Q8IYK4 626 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 XXYLT1Q8NBI6 393 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 EHBP1Q8NDI1 1231 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 TMEM174Q8WUU8 243 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 SYN2Q92777 582 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-216ENST00000484087 PGBD4Q96DM1 585 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 SPAG5Q96R06 1193 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 FIZ1Q96SL8 496 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 STRA6Q9BX79 667 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 MRPL9Q9BYD2 267 aaKnown RBP7.47□□□□□ -1.21
BRCA1-216ENST00000484087 TSGA10Q9BZW7 698 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 C2orf40Q9H1Z8 148 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 CDT1Q9H211 546 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 NHEJ1Q9H9Q4 299 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-216ENST00000484087 CD320Q9NPF0 282 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 LZTFL1Q9NQ48 299 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 PLCB1Q9NQ66 1216 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 SPG21Q9NZD8 308 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 LMCD1Q9NZU5 365 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 CLEC1BQ9P126 229 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 ARHGAP28Q9P2N2 729 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 MYO1AQ9UBC5 1043 aa7.47□□□□□ -1.21
BRCA1-216ENST00000484087 ZMYM2Q9UBW7 1377 aa7.46□□□□□ -1.21
BRCA1-216ENST00000484087 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 LRRC53A6NM62 1247 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 EIF3CLB5ME19 914 aaKnown RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 K7ERI5 159 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 RNF225M0QZC1 329 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 MAPK13O15264 365 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 KRT86O43790 486 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 KIF4AO95239 1232 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 AXLP30530 894 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 TNFSF9P41273 254 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms