RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TRMT10CQ7L0Y3 403 aaKnown RBP12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 SLC9A9Q8IVB4 645 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 SRRM1Q8IYB3 904 aaKnown RBP12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 ZDHHC14Q8IZN3 488 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 LMO3Q8TAP4 145 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 CD101Q93033 1021 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 FNBP1Q96RU3 617 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 WNT8AQ9H1J5 351 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 EBF3Q9H4W6 596 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 AGPAT3Q9NRZ7 376 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 SPATA31A6Q5VVP1 1343 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 HLA-DOAP06340 250 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 AMPD1P23109 780 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 CA8P35219 290 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 RRP1BQ14684 758 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 USH1GQ495M9 461 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 EAPPQ56P03 285 aaPredicted RBP12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 KLHL35Q6PF15 583 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 SCYL3Q8IZE3 742 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 MYCT1Q8N699 235 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 DIS3LQ8TF46 1054 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 C10orf82Q8WW14 230 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 IRGQQ8WZA9 623 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 NYAP2Q9P242 653 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 POLLQ9UGP5 575 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 SMIM31A0A1B0GVY4 71 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 EML1O00423 815 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 VILLO15195 856 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 PGM3O95394 542 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 HSPA1LP34931 641 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 COILP38432 576 aaPredicted RBP12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 MARCKSL1P49006 195 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 WDR4P57081 412 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 GPC5P78333 572 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 MAP3K10Q02779 954 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 BFSP1Q12934 665 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 CDC16Q13042 620 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 MYBPC2Q14324 1141 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 AADACL2Q6P093 401 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 CCDC174Q6PII3 467 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 ZNF720Q7Z2F6 126 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 SAPCD2Q86UD0 394 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 MTDHQ86UE4 582 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 SLCO2A1Q92959 643 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 SERPINB12Q96P63 405 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 IKZF4Q9H2S9 585 aa12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 CDC42EP4Q9H3Q1 356 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 TUT1Q9H6E5 874 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 SEPT11Q9NVA2 429 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-205ENST00000483956 SIPA1L1O43166 1804 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 FAM170AA1A519 330 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 ANKRD63C9JTQ0 380 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 FOXN3O00409 490 aaPredicted RBP12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 TRIM49P0CI25 452 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 TRIM49CP0CI26 452 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 PORP16435 677 aaPredicted RBP12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 MUTP22033 750 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 GTF2H1P32780 548 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 ARFIP2P53365 341 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 DCTN2Q13561 401 aaKnown RBP12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 COG2Q14746 738 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 SLFN13Q68D06 897 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 PRR5LQ6MZQ0 368 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 B3GNT6Q6ZMB0 384 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 RBM44Q6ZP01 1051 aaKnown RBP12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 DEPTORQ8TB45 409 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 MCUR1Q96AQ8 359 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 BTBD10Q9BSF8 475 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 USP29Q9HBJ7 922 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 KCND2Q9NZV8 630 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 MTUS1Q9ULD2 1270 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 LOXHD1Q8IVV2 1947 aa12.21□□□□□ -0.46
SEC61A1-205ENST00000483956 CCDC160A6NGH7 325 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 SFI1A8K8P3 1242 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 NDUFB5O43674 189 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 BBOX1O75936 387 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 FTLP02792 175 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 SIX1Q15475 284 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 ARHGAP44Q17R89 818 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 CLNKQ7Z7G1 428 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 SLC20A1Q8WUM9 679 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 DGCR14Q96DF8 476 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 MPHOSPH6Q99547 160 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 DNAJC17Q9NVM6 304 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 TMED5Q9Y3A6 229 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 P4HA2O15460 535 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 GYG2O15488 501 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 CCDC22O60826 627 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 USP1O94782 785 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 COMTP21964 271 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 ATP5DP30049 168 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 HALP42357 657 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 PSMD7P51665 324 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 CCR3P51677 355 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 GTF2IP78347 998 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 IL9RQ01113 521 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 ACAD11Q709F0 780 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 SLC13A5Q86YT5 568 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms