RNA–Protein interactions for RNA: ENST00000483753.1

PLXNB1-216, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-216ENST00000483753 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 RAB44Q7Z6P3 723 aaPredicted RBP12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 MFSD6LQ8IWD5 586 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 CHCHD4Q8N4Q1 142 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 SMARCD2Q92925 531 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 TTPALQ9BTX7 342 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 KIFC3Q9BVG8 833 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 NXF3Q9H4D5 531 aaKnown RBP12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 CCDC86Q9H6F5 360 aaKnown RBP12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 TRPV4Q9HBA0 871 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 POLD4Q9HCU8 107 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
PLXNB1-216ENST00000483753 SF3B1O75533 1304 aaKnown RBP eCLIP12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 SHROOM3Q8TF72 1996 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 SPAARA0A1B0GVQ0 90 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 WDR27A2RRH5 827 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 UPK3BL1B0FP48 263 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 UPK3BL2E5RIL1 263 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 K7ELQ4 463 aaPredicted RBP12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 TADA2AO75478 443 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 BMP15O95972 392 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 PRPF4BQ13523 1007 aaKnown RBP12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 ZNF605Q86T29 641 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 RALGPS2Q86X27 583 aaPredicted RBP12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 CAMKK1Q8N5S9 505 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 GSTCDQ8NEC7 633 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 CSGALNACT1Q8TDX6 532 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 ZFP42Q96MM3 310 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 UBL7Q96S82 380 aaPredicted RBP12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 PLIN2Q99541 437 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 MMTAG2Q9BU76 263 aaKnown RBP12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 FZD8Q9H461 694 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 APC2O95996 2303 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 TRIP11Q15643 1979 aa12.67□□□□□ -0.38
PLXNB1-216ENST00000483753 NCANO14594 1321 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 A0A1B0GUA9 196 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 CCDC169A6NNP5 214 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 SPECC1L-ADORA2AF8WAN1 911 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 N4BP3O15049 544 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 MEFVO15553 781 aaPredicted RBP12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 HIP1RO75146 1068 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 AKAP5P24588 427 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 CTHP32929 405 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 SOX9P48436 509 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 IRX4P78413 519 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 DMP1Q13316 513 aaPredicted RBP12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 SF3A1Q15459 793 aaKnown RBP12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 UAP1L1Q3KQV9 507 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 KCNK18Q7Z418 384 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 RASSF8Q8NHQ8 419 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 SLC39A7Q92504 469 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 TCEAL4Q96EI5 215 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 INTS4Q96HW7 963 aaKnown RBP12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 DRC1Q96MC2 740 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 ZSWIM3Q96MP5 696 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 ADPGKQ9BRR6 497 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 RUSC1Q9BVN2 902 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 PARP2Q9UGN5 583 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 GIT1Q9Y2X7 761 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 VWA8A3KMH1 1905 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 MYO18BQ8IUG5 2567 aa12.66□□□□□ -0.38
PLXNB1-216ENST00000483753 PLXNB3Q9ULL4 1909 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 ARHGEF37A1IGU5 675 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 SLC38A8A6NNN8 435 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 ACKR2O00590 384 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 ZNF197O14709 1029 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 CHADO15335 359 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 SYT1P21579 422 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 UBA7P41226 1012 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 VIPR2P41587 438 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 KPNA1P52294 538 aaPredicted RBP12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 EFNA5P52803 228 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 PEX3P56589 373 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 SEMA3BQ13214 749 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 KARSQ15046 597 aaKnown RBP12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 ZNF423Q2M1K9 1284 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 HYIQ5T013 277 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 FAM171A1Q5VUB5 890 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 RINT1Q6NUQ1 792 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 PKN3Q6P5Z2 889 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 PDXDC1Q6P996 788 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 CALML4Q96GE6 196 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 AK8Q96MA6 479 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 PNMA5Q96PV4 448 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 HNRNPABQ99729 332 aaKnown RBP12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 CCDC113Q9H0I3 377 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 PDZD7Q9H5P4 517 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 KLK14Q9P0G3 267 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 USP20Q9Y2K6 914 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 RAXQ9Y2V3 346 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 CITO14578 2027 aa12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 URB1O60287 2271 aaKnown RBP12.65□□□□□ -0.38
PLXNB1-216ENST00000483753 PHLPP2Q6ZVD8 1323 aa12.64□□□□□ -0.39
PLXNB1-216ENST00000483753 ZNF462Q96JM2 2506 aa12.64□□□□□ -0.39
PLXNB1-216ENST00000483753 HECTD1Q9ULT8 2610 aa12.64□□□□□ -0.39
PLXNB1-216ENST00000483753 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms