RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PCBP1Q15365 356 aaKnown RBP eCLIP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 LETM2Q2VYF4 491 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 KANK3Q6NY19 840 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 CYP26C1Q6V0L0 522 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 RUFY3Q7L099 469 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 OTUD6AQ7L8S5 288 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 ASCL5Q7RTU5 278 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 VN1R5Q7Z5H4 357 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 MRPL10Q7Z7H8 261 aaKnown RBP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 SKAP1Q86WV1 359 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 ZNF280BQ86YH2 543 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 HACE1Q8IYU2 909 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 CMASQ8NFW8 434 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 PRPF31Q8WWY3 499 aaKnown RBP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 CCDC51Q96ER9 411 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 MBOAT7Q96N66 472 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 NAP1L4Q99733 375 aaKnown RBP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 LPIN3Q9BQK8 851 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 RTP3Q9BQQ7 232 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 HERC2P3Q9BVR0 1158 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 SMG9Q9H0W8 520 aaKnown RBP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 DHX33Q9H6R0 707 aaKnown RBP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 KCNK12Q9HB15 430 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 IFT122Q9HBG6 1241 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 DUSP12Q9UNI6 340 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 TRIOO75962 3097 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 USP34Q70CQ2 3546 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 ELOA3CA0A087WX78 387 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 CCDC195A0A1B0GUA6 201 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 ELOA3DA6NLF2 546 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 NRP1O14786 923 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 TBX3O15119 743 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 INPPL1O15357 1258 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 SLC37A4O43826 429 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 CDKL5O76039 1030 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 DDHD2O94830 711 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 BAG4O95429 457 aaKnown RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 GLUD1P00367 558 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 NCLP19338 710 aaKnown RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 AOC1P19801 751 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 AXLP30530 894 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 YWHABP31946 246 aaKnown RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 OR1G1P47890 313 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 GLUD2P49448 558 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 PPP2R3AQ06190 1150 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 PCDH1Q08174 1060 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 LAMTOR4Q0VGL1 99 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 TFDP1Q14186 410 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 MXD4Q14582 209 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 EPHA7Q15375 998 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 INF2Q27J81 1249 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 ZNF423Q2M1K9 1284 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 ELOA3BQ3SY89 546 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 XKR9Q5GH70 373 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 CWF19L1Q69YN2 538 aaKnown RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 PPP4R3AQ6IN85 833 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 NOTUMQ6P988 496 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 DPH6Q7L8W6 267 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 FRMD5Q7Z6J6 570 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 NEK8Q86SG6 692 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 TRIM42Q8IWZ5 723 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 C4orf19Q8IY42 314 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 CCDC105Q8IYK2 499 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 GPR161Q8N6U8 529 aaKnown RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 RNF149Q8NC42 400 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 ELOA3Q8NG57 546 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 TMEM143Q96AN5 459 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 ZNF274Q96GC6 653 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 RPS6KC1Q96S38 1066 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 LXNQ9BS40 222 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 VN1R3Q9BXE9 311 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 RHOBTB2Q9BYZ6 727 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 TRIM6Q9C030 488 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 ZSWIM4Q9H7M6 989 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 WDR6Q9NNW5 1121 aaKnown RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 MAN1C1Q9NR34 630 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 WNT16Q9UBV4 365 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 GPN3Q9UHW5 284 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 TRIM33Q9UPN9 1127 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 PRG3Q9Y2Y8 225 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-207ENST00000483407 CYP46A1Q9Y6A2 500 aa6.52□□□□□ -1.37
CSDE1-207ENST00000483407 CLUHO75153 1309 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 CACNA1HO95180 2353 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 INO80B-WBP1J3KQ70 363 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 TEX28O15482 410 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 EPB41L2O43491 1005 aaKnown RBP6.51□□□□□ -1.37
CSDE1-207ENST00000483407 B4GALT3O60512 393 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 CCNT1O60563 726 aaKnown RBP6.51□□□□□ -1.37
CSDE1-207ENST00000483407 C1RP00736 705 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 IGHA1P01876 353 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 TFE3P19532 575 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-207ENST00000483407 BMP6P22004 513 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 HOXA11P31270 313 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-207ENST00000483407 MLH1P40692 756 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 AFF1P51825 1210 aaKnown RBP6.51□□□□□ -1.37
CSDE1-207ENST00000483407 DSG1Q02413 1049 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 CREMQ03060 361 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 STK3Q13188 491 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms