RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SLC9A1P19634 815 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 EXOC3L4Q17RC7 722 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 SGSM1Q2NKQ1 1148 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 FILIP1LQ4L180 1135 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 RTP2Q5QGT7 225 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 FKBP15Q5T1M5 1219 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 KIAA1841Q6NSI8 718 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 APTXQ7Z2E3 356 aaKnown RBP14.2□□□□□ -0.14
HDAC1-208ENST00000482310 TMC7Q7Z402 723 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 DDX53Q86TM3 631 aaKnown RBP14.2□□□□□ -0.14
HDAC1-208ENST00000482310 SPPL3Q8TCT6 385 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 MICAL1Q8TDZ2 1067 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 RIN2Q8WYP3 895 aaPredicted RBP14.2□□□□□ -0.14
HDAC1-208ENST00000482310 TATDN2Q93075 761 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 SUSD3Q96L08 255 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 NAP1L5Q96NT1 182 aaPredicted RBP14.2□□□□□ -0.14
HDAC1-208ENST00000482310 CDX2Q99626 313 aaPredicted RBP14.2□□□□□ -0.14
HDAC1-208ENST00000482310 TCF25Q9BQ70 676 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 HERC2P3Q9BVR0 1158 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 LSM14BQ9BX40 385 aaKnown RBP14.2□□□□□ -0.14
HDAC1-208ENST00000482310 XYLT2Q9H1B5 865 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 IFNKQ9P0W0 207 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 PTPRDP23468 1912 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-208ENST00000482310 H3BNC9 293 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 HCRTO43612 131 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 TRAPPC3O43617 180 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 HUS1O60921 280 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 ASS1P00966 412 aaKnown RBP14.19□□□□□ -0.14
HDAC1-208ENST00000482310 SOD2P04179 222 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 URODP06132 367 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 RB1P06400 928 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 RPL17P18621 184 aaKnown RBP14.19□□□□□ -0.14
HDAC1-208ENST00000482310 CD58P19256 250 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 ATICP31939 592 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 IRS1P35568 1242 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 GLUD2P49448 558 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 CDH8P55286 799 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 ARPP19P56211 112 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 UBASH3AP57075 661 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 ERVFC1P60507 584 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 PLCB3Q01970 1234 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 GRIN2CQ14957 1233 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 USP41Q3LFD5 358 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 WSCD1Q658N2 575 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 GJB7Q6PEY0 223 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 RRAGAQ7L523 313 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 ARHGEF19Q8IW93 802 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 ADGRF2Q8IZF7 708 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 MICALL1Q8N3F8 863 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 PPM1KQ8N3J5 372 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 PDCL2Q8N4E4 241 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 APPL2Q8NEU8 664 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 NT5C1BQ96P26 610 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 ARID3AQ99856 593 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 MRPL45Q9BRJ2 306 aaKnown RBP14.19□□□□□ -0.14
HDAC1-208ENST00000482310 TLR9Q9NR96 1032 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 PUF60Q9UHX1 559 aaKnown RBP14.19□□□□□ -0.14
HDAC1-208ENST00000482310 PCDHB8Q9UN66 801 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 L1RE1Q9UN81 338 aa14.19□□□□□ -0.14
HDAC1-208ENST00000482310 CARNS1A5YM72 827 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 WEE2P0C1S8 567 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 PON1P27169 355 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 AARSP49588 968 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDAC1-208ENST00000482310 MCCD1P59942 119 aaPredicted RBP14.18□□□□□ -0.14
HDAC1-208ENST00000482310 ELAVL2Q12926 359 aaKnown RBP14.18□□□□□ -0.14
HDAC1-208ENST00000482310 ORC1Q13415 861 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 SYCP1Q15431 976 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 VARS2Q5ST30 1063 aaKnown RBP14.18□□□□□ -0.14
HDAC1-208ENST00000482310 TRIM65Q6PJ69 517 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.18□□□□□ -0.14
HDAC1-208ENST00000482310 METTL23Q86XA0 190 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 GPIHBP1Q8IV16 184 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 EHBP1Q8NDI1 1231 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 KAT5Q92993 513 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 TTPALQ9BTX7 342 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 NIF3L1Q9GZT8 377 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 ZBP1Q9H171 429 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 SDCBP2Q9H190 292 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 COQ4Q9Y3A0 265 aa14.18□□□□□ -0.14
HDAC1-208ENST00000482310 PRRC2BQ5JSZ5 2229 aaKnown RBP14.18□□□□□ -0.14
HDAC1-208ENST00000482310 A0A1B0GTH6 734 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 M0QZQ0 153 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 P4HA2O15460 535 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 CXCL14O95715 111 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 P4HA1P13674 534 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 IGFBP4P22692 258 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 ACAT1P24752 427 aaKnown RBP14.17□□□□□ -0.14
HDAC1-208ENST00000482310 ASPAP45381 313 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 YWHAHQ04917 246 aaPredicted RBP14.17□□□□□ -0.14
HDAC1-208ENST00000482310 KCNMA1Q12791 1236 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 PSMD5Q16401 504 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 ARHGAP44Q17R89 818 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 SOWAHAQ2M3V2 549 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 OVOS1Q6IE37 1185 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 OSTM1Q86WC4 334 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 OR6B3Q8NGW1 331 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 LMO3Q8TAP4 145 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 XPO4Q9C0E2 1151 aaKnown RBP14.17□□□□□ -0.14
HDAC1-208ENST00000482310 UBE2TQ9NPD8 197 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms