RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 NCK2O43639 380 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 DKC1O60832 514 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS41-212ENST00000482217 BBOX1O75936 387 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 DDX58O95786 925 aaKnown RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 CKMT1AP12532 417 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 KRT10P13645 584 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 ATP6V1B1P15313 513 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 VEGFAP15692 232 aaPredicted RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 VCAM1P19320 739 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 FGFR4P22455 802 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 ANP32AP39687 249 aaKnown RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 ADCY8P40145 1251 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 LIFRP42702 1097 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 TNNT3P45378 269 aaPredicted RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 PRIM2P49643 509 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 CTCFP49711 727 aaPredicted RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 CTSWP56202 376 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 NRG3P56975 720 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 DCAF7P61962 342 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 PPARAQ07869 468 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 SEMA5AQ13591 1074 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 TAF5Q15542 800 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 CCDC38Q502W7 563 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 MBNL2Q5VZF2 373 aaKnown RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 ISM2Q6H9L7 571 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 Q6ZUG5 572 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 OTUD6AQ7L8S5 288 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 OVCH2Q7RTZ1 564 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 GALNTL5Q7Z4T8 443 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 NLRP14Q86W24 1093 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 IQCA1Q86XH1 822 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 VSIG1Q86XK7 387 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 GLB1L2Q8IW92 636 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 BCL6BQ8N143 479 aaPredicted RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 CARFQ8N187 725 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 OR2C3Q8N628 320 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 PCYOX1LQ8NBM8 494 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 CCDC191Q8NCU4 936 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 PPP1R14CQ8TAE6 165 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 GABPB2Q8TAK5 448 aaPredicted RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 TRIM63Q969Q1 353 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 AJUBAQ96IF1 538 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 DYDC2Q96IM9 177 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 JAKMIP1Q96N16 626 aaKnown RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 MOGAT1Q96PD6 335 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 FAM193BQ96PV7 902 aaPredicted RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 ACO2Q99798 780 aaKnown RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 SDF4Q9BRK5 362 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 POLR3CQ9BUI4 534 aaPredicted RBP4.63□□□□□ -1.67
VPS41-212ENST00000482217 KATNBL1Q9H079 304 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 TMEM168Q9H0V1 697 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 PRDM12Q9H4Q4 367 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 CYP4F11Q9HBI6 524 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 KCTD5Q9NXV2 234 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 DACT1Q9NYF0 836 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 GRHPRQ9UBQ7 328 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 DPP7Q9UHL4 492 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 FBXL5Q9UKA1 691 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 USP18Q9UMW8 372 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 INVSQ9Y283 1065 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 ATP6V0A2Q9Y487 856 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 PCDHGB5Q9Y5G0 923 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 DOK2O60496 412 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 SEC24DO94855 1032 aaPredicted RBP4.62□□□□□ -1.67
VPS41-212ENST00000482217 FSBPO95073 299 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 TGDSO95455 350 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 MT-ND3P03897 115 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 HMGCRP04035 888 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 CYP1A1P04798 512 aaPredicted RBP4.62□□□□□ -1.67
VPS41-212ENST00000482217 POU2F2P09086 479 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 CCDC175P0C221 793 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 HSPA6P17066 643 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 HOXA5P20719 270 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 PAX7P23759 505 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 PIK3CBP42338 1070 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 SLC12A2P55011 1212 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 ANTXR2P58335 489 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 MRPS35P82673 323 aaKnown RBP4.62□□□□□ -1.67
VPS41-212ENST00000482217 ACAP2Q15057 778 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 RRP12Q5JTH9 1297 aaKnown RBP4.62□□□□□ -1.67
VPS41-212ENST00000482217 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 KAZNQ674X7 775 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 TRIM68Q6AZZ1 485 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 SDCCAG8Q86SQ7 713 aaPredicted RBP4.62□□□□□ -1.67
VPS41-212ENST00000482217 EPHX4Q8IUS5 362 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 KLHL36Q8N4N3 616 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 NUDT10Q8NFP7 164 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 TSPEARQ8WU66 669 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 JADE3Q92613 823 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 FATE1Q969F0 183 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 GFM2Q969S9 779 aaKnown RBP4.62□□□□□ -1.67
VPS41-212ENST00000482217 NUDT11Q96G61 164 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 TEKT5Q96M29 485 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 WDR92Q96MX6 357 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 MPHOSPH8Q99549 860 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 NUP88Q99567 741 aaPredicted RBP4.62□□□□□ -1.67
VPS41-212ENST00000482217 ADPGKQ9BRR6 497 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 CARD11Q9BXL7 1154 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 STK31Q9BXU1 1019 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 UNKQ9C0B0 810 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms