RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 CYFIP2Q96F07 1278 aa12.47□□□□□ -0.41
GGPS1-205ENST00000482013 CAPZA3Q96KX2 299 aa12.47□□□□□ -0.41
GGPS1-205ENST00000482013 SENP6Q9GZR1 1112 aaPredicted RBP12.47□□□□□ -0.41
GGPS1-205ENST00000482013 DNAI2Q9GZS0 605 aa12.47□□□□□ -0.41
GGPS1-205ENST00000482013 WNT8AQ9H1J5 351 aa12.47□□□□□ -0.41
GGPS1-205ENST00000482013 MRPL47Q9HD33 250 aaKnown RBP12.47□□□□□ -0.41
GGPS1-205ENST00000482013 OSGEPQ9NPF4 335 aa12.47□□□□□ -0.41
GGPS1-205ENST00000482013 NXF1Q9UBU9 619 aaKnown RBP12.47□□□□□ -0.41
GGPS1-205ENST00000482013 CNOT8Q9UFF9 292 aaKnown RBP12.47□□□□□ -0.41
GGPS1-205ENST00000482013 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.47□□□□□ -0.41
GGPS1-205ENST00000482013 COG5Q9UP83 839 aa12.47□□□□□ -0.41
GGPS1-205ENST00000482013 CEP83Q9Y592 693 aa12.47□□□□□ -0.41
GGPS1-205ENST00000482013 V9GYY5 206 aaPredicted RBP12.47□□□□□ -0.41
GGPS1-205ENST00000482013 ZNF185O15231 689 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 TLR3O15455 904 aaKnown RBP12.46□□□□□ -0.41
GGPS1-205ENST00000482013 CILPO75339 1184 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 RPS6KA5O75582 802 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 RECQL4O94761 1208 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 CALB1P05937 261 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 WEE2P0C1S8 567 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 PNPLA4P41247 253 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 TNNC1P63316 161 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 INCA1Q0VD86 236 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 BRD3Q15059 726 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 GLE1Q53GS7 698 aaKnown RBP12.46□□□□□ -0.41
GGPS1-205ENST00000482013 FAM47CQ5HY64 1035 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 NAA35Q5VZE5 725 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 SCARA3Q6AZY7 606 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 RASGEF1CQ8N431 466 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 USP38Q8NB14 1042 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 ZNF564Q8TBZ8 553 aaPredicted RBP12.46□□□□□ -0.41
GGPS1-205ENST00000482013 NUP85Q9BW27 656 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 TRAIPQ9BWF2 469 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 CARD9Q9H257 536 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 HMX1Q9NP08 348 aaPredicted RBP12.46□□□□□ -0.41
GGPS1-205ENST00000482013 RAB21Q9UL25 225 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 BARX2Q9UMQ3 279 aaPredicted RBP12.46□□□□□ -0.41
GGPS1-205ENST00000482013 POLIQ9UNA4 740 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 NOC2LQ9Y3T9 749 aaKnown RBP12.46□□□□□ -0.41
GGPS1-205ENST00000482013 ALG6Q9Y672 507 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 SCINQ9Y6U3 715 aa12.46□□□□□ -0.41
GGPS1-205ENST00000482013 SMIM28A0A1B0GU29 152 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 PDE2AO00408 941 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-205ENST00000482013 KCNK3O14649 394 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 DDX3YO15523 660 aaKnown RBP12.45□□□□□ -0.42
GGPS1-205ENST00000482013 CHRNA1P02708 482 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 VDRP11473 427 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 CD58P19256 250 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 CTNNA2P26232 953 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 SLC1A1P43005 524 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 ACLYP53396 1101 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 RAD23BP54727 409 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 TAP1Q03518 808 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 ITGA7Q13683 1181 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 PTGISQ16647 500 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 PLEKHA7Q6IQ23 1121 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 UBL4BQ8N7F7 174 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 ARRDC4Q8NCT1 418 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 SPATA4Q8NEY3 305 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 WHAMMQ8TF30 809 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 PPP1R13LQ8WUF5 828 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 CPA5Q8WXQ8 436 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 TMEM176AQ96HP8 235 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 ZNF560Q96MR9 790 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 NAP1L3Q99457 506 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-205ENST00000482013 PARD6BQ9BYG5 372 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 NXF3Q9H4D5 531 aaKnown RBP12.45□□□□□ -0.42
GGPS1-205ENST00000482013 ADAM22Q9P0K1 906 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 PARP2Q9UGN5 583 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 ST3GAL5Q9UNP4 418 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 IPPQ9Y573 584 aa12.45□□□□□ -0.42
GGPS1-205ENST00000482013 FRMPD3Q5JV73 1810 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 GRIN2DO15399 1336 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 CCDC66A2RUB6 948 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 CCDC151A5D8V7 595 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 PIRO00625 290 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 ZNF623O75123 536 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 SKIP12755 728 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 ZSCAN20P17040 1043 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-205ENST00000482013 MMP8P22894 467 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 CXCR5P32302 372 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 RAB27AP51159 221 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 GSCP56915 257 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-205ENST00000482013 PTP4A2Q12974 167 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 CNGA2Q16280 664 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 PPP2R5EQ16537 467 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 TWF2Q6IBS0 349 aaKnown RBP12.44□□□□□ -0.42
GGPS1-205ENST00000482013 WDR93Q6P2C0 686 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 SCARA5Q6ZMJ2 495 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 MRPL10Q7Z7H8 261 aaKnown RBP12.44□□□□□ -0.42
GGPS1-205ENST00000482013 UNC93AQ86WB7 457 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 SLC4A11Q8NBS3 891 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 ZNF784Q8NCA9 323 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-205ENST00000482013 SMG8Q8ND04 991 aaKnown RBP12.44□□□□□ -0.42
GGPS1-205ENST00000482013 HNRNPLLQ8WVV9 542 aaKnown RBP12.44□□□□□ -0.42
GGPS1-205ENST00000482013 GLT1D1Q96MS3 346 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 ZMAT2Q96NC0 199 aaKnown RBP12.44□□□□□ -0.42
GGPS1-205ENST00000482013 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.44□□□□□ -0.42
GGPS1-205ENST00000482013 SDCBP2Q9H190 292 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 ANKZF1Q9H8Y5 726 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms