RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CISHQ9NSE2 258 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 GNEQ9Y223 722 aaKnown RBP15.39■□□□□ 0.05
CHD3-211ENST00000481999 TMEM88BA6NKF7 163 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 TSPAN1O60635 241 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 ITGB3P05106 788 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 ZNF865P0CJ78 1059 aaPredicted RBP15.39■□□□□ 0.05
CHD3-211ENST00000481999 ASPAP45381 313 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 APLP1P51693 650 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 CDR1P51861 262 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 C1QTNF8P60827 252 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 PDCLQ13371 301 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 TRPC3Q13507 836 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 ZNF699Q32M78 642 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 WDR72Q3MJ13 1102 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 MMS22LQ6ZRQ5 1243 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 MCOLN2Q8IZK6 566 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 TFAP2BQ92481 460 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 IMPG2Q9BZV3 1241 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 RPF1Q9H9Y2 349 aaKnown RBP15.39■□□□□ 0.05
CHD3-211ENST00000481999 ANAPC7Q9UJX3 599 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 GTF3C4Q9UKN8 822 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 PPME1Q9Y570 386 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 MROH7Q68CQ1 1323 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 SLC15A5A6NIM6 579 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 CYP1A2P05177 515 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 NR1D1P20393 614 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 HSD17B3P37058 310 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 CRHR2Q13324 411 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 SKIDA1Q1XH10 827 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 SLC10A6Q3KNW5 377 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 CEP85LQ5SZL2 805 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 TTC19Q6DKK2 380 aaPredicted RBP15.38■□□□□ 0.05
CHD3-211ENST00000481999 ENOSF1Q7L5Y1 443 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 TMEM40Q8WWA1 233 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 ZNF606Q8WXB4 792 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 VTI1AQ96AJ9 217 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 PRMT7Q9NVM4 692 aaPredicted RBP15.38■□□□□ 0.05
CHD3-211ENST00000481999 TJP2Q9UDY2 1190 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 MYADML2A6NDP7 307 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 SMIM10L2AP0DMW4 78 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 SMIM10L2BP0DMW5 78 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 PYGMP11217 842 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 SCP2P22307 547 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 TMOD1P28289 359 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 ATP1A2P50993 1020 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 CAP1Q01518 475 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 MTMR3Q13615 1198 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 PPM1EQ8WY54 764 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 SDCBP2Q9H190 292 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 TMEM51Q9NW97 253 aa15.38■□□□□ 0.05
CHD3-211ENST00000481999 SPOPO43791 374 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 ZEB2O60315 1214 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 CYP1A1P04798 512 aaPredicted RBP15.37■□□□□ 0.05
CHD3-211ENST00000481999 NSFP46459 744 aaKnown RBP15.37■□□□□ 0.05
CHD3-211ENST00000481999 NOMO3P69849 1222 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 HTRA3P83110 453 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 CLUL1Q15846 466 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 PPP2R5EQ16537 467 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 GLRA4Q5JXX5 417 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 EXOC8Q8IYI6 725 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 SEC14L1Q92503 715 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 TWNKQ96RR1 684 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 NAP1L3Q99457 506 aaPredicted RBP15.37■□□□□ 0.05
CHD3-211ENST00000481999 EIF2AQ9BY44 585 aaKnown RBP15.37■□□□□ 0.05
CHD3-211ENST00000481999 CARD9Q9H257 536 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 SMYD3Q9H7B4 428 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 MAGEB2O15479 319 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 TTI1O43156 1089 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 TREHO43280 583 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 ERLIN2O94905 339 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 MYZAPP0CAP1 466 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 ENPEPQ07075 957 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 IQSEC1Q6DN90 963 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 RGMBQ6NW40 437 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 C17orf99Q6UX52 265 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 MON1BQ7L1V2 547 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 UBR7Q8N806 425 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 TRIM31Q9BZY9 425 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 NIF3L1Q9GZT8 377 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 TMBIM4Q9HC24 238 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 FAM114A2Q9NRY5 505 aa15.37■□□□□ 0.05
CHD3-211ENST00000481999 ABT1Q9ULW3 272 aaKnown RBP15.37■□□□□ 0.05
CHD3-211ENST00000481999 NDUFAB1O14561 156 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 ASAP2O43150 1006 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 TCF4P15884 667 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 PEX5P50542 639 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 RPL7AP62424 266 aaKnown RBP15.36■□□□□ 0.05
CHD3-211ENST00000481999 CENPCQ03188 943 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 ARFGAP2Q8N6H7 521 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 DNAJB3Q8WWF6 145 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 TRIM51Q9BSJ1 452 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 UTP11Q9Y3A2 253 aaKnown RBP15.36■□□□□ 0.05
CHD3-211ENST00000481999 A6NJR5 290 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 DAPK3O43293 454 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 B4GALT4O60513 344 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 HOXD8P13378 290 aaPredicted RBP15.36■□□□□ 0.05
CHD3-211ENST00000481999 HOXA11P31270 313 aaPredicted RBP15.36■□□□□ 0.05
CHD3-211ENST00000481999 CTNNA1P35221 906 aaKnown RBP15.36■□□□□ 0.05
CHD3-211ENST00000481999 ZNF132P52740 706 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms