RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 MCEEQ96PE7 176 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 CELF4Q9BZC1 486 aaKnown RBP20.34■□□□□ 0.85
CCM2-214ENST00000481194 BAZ2AQ9UIF9 1905 aaKnown RBP20.34■□□□□ 0.85
CCM2-214ENST00000481194 PPP2R5DQ14738 602 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 PRAMEF19Q5SWL8 479 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 EP400NLQ6ZTU2 488 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 STKLD1Q8NE28 680 aa20.34■□□□□ 0.85
CCM2-214ENST00000481194 I3L4J1 428 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 SGPL1O95470 568 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 FTHL17Q9BXU8 183 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 CHST12Q9NRB3 414 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 BARX2Q9UMQ3 279 aaPredicted RBP20.33■□□□□ 0.85
CCM2-214ENST00000481194 ZNF536O15090 1300 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 PPP1R12AO14974 1030 aaPredicted RBP20.33■□□□□ 0.85
CCM2-214ENST00000481194 CDH6P55285 790 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 ROR1Q01973 937 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 ZBTB16Q05516 673 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 CC2D1AQ6P1N0 951 aaPredicted RBP20.33■□□□□ 0.85
CCM2-214ENST00000481194 NDUFAF2Q8N183 169 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 DHX35Q9H5Z1 703 aaKnown RBP20.33■□□□□ 0.85
CCM2-214ENST00000481194 CISHQ9NSE2 258 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 HPCAL4Q9UM19 191 aa20.33■□□□□ 0.85
CCM2-214ENST00000481194 EIF4BP23588 611 aaKnown RBP20.33■□□□□ 0.84
CCM2-214ENST00000481194 GLRA4Q5JXX5 417 aa20.33■□□□□ 0.84
CCM2-214ENST00000481194 POP1Q99575 1024 aaKnown RBP20.33■□□□□ 0.84
CCM2-214ENST00000481194 PDGFCQ9NRA1 345 aa20.33■□□□□ 0.84
CCM2-214ENST00000481194 OAS2P29728 719 aaKnown RBP20.33■□□□□ 0.84
CCM2-214ENST00000481194 CYP4F22Q6NT55 531 aa20.33■□□□□ 0.84
CCM2-214ENST00000481194 GSDMBQ8TAX9 411 aa20.33■□□□□ 0.84
CCM2-214ENST00000481194 FAM49BQ9NUQ9 324 aa20.33■□□□□ 0.84
CCM2-214ENST00000481194 MORF4L1Q9UBU8 362 aa20.33■□□□□ 0.84
CCM2-214ENST00000481194 CASP5P51878 434 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 ARL4CP56559 192 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 NME3Q13232 169 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 LACTBL1A8MY62 500 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 PSTPIP1O43586 416 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 SRGAP2O75044 1071 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 TOMM70O94826 608 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 INHBAP08476 426 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 RNF208Q9H0X6 261 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 Q9Y3F1 56 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 UPP2O95045 317 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 OLFML2BQ68BL8 750 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 TTC25Q96NG3 672 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 DERAQ9Y315 318 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 MYH1P12882 1939 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 RGS7P49802 495 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 DNAAF3Q8N9W5 541 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 CCDC68Q9H2F9 335 aa20.32■□□□□ 0.84
CCM2-214ENST00000481194 B3GAT3O94766 335 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 DHX9Q08211 1270 aaKnown RBP20.31■□□□□ 0.84
CCM2-214ENST00000481194 FAF2Q96CS3 445 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 TTC1Q99614 292 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 EBAG9O00559 213 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 FSTL1Q12841 308 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 CXCL17Q6UXB2 119 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 TMEM169Q96HH4 297 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 HEMGNQ9BXL5 484 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 FRMD8P1Q9BZ68 369 aaPredicted RBP20.31■□□□□ 0.84
CCM2-214ENST00000481194 RSAD1Q9HA92 442 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 CDY2AQ9Y6F7 541 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 VIMP08670 466 aaKnown RBP20.31■□□□□ 0.84
CCM2-214ENST00000481194 PTPN11Q06124 597 aaPredicted RBP20.31■□□□□ 0.84
CCM2-214ENST00000481194 CLEC16AQ2KHT3 1053 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 JADE1Q6IE81 842 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 C1orf131Q8NDD1 294 aaKnown RBP20.31■□□□□ 0.84
CCM2-214ENST00000481194 WDR24Q96S15 920 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 ATP11BQ9Y2G3 1177 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 CFAP69A5D8W1 941 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 HEATR6Q6AI08 1181 aaKnown RBP20.31■□□□□ 0.84
CCM2-214ENST00000481194 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.31■□□□□ 0.84
CCM2-214ENST00000481194 VCPIP1Q96JH7 1222 aa20.31■□□□□ 0.84
CCM2-214ENST00000481194 CREB3O43889 395 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 XPAP23025 273 aaPredicted RBP20.3■□□□□ 0.84
CCM2-214ENST00000481194 TMEM86AQ8N2M4 240 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 PPP1R2P1Q96PQ5 205 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 C2CD2Q9Y426 696 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 DPYSL4O14531 572 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 BMP6P22004 513 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 TNRC6CQ9HCJ0 1690 aaKnown RBP20.3■□□□□ 0.84
CCM2-214ENST00000481194 C1QBPQ07021 282 aaKnown RBP20.3■□□□□ 0.84
CCM2-214ENST00000481194 SLC35G1Q2M3R5 365 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 ZNF280DQ6N043 979 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 B4GALNT4Q76KP1 1039 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 RASAL3Q86YV0 1011 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 ZDHHC17Q8IUH5 632 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 TPCN2Q8NHX9 752 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 GDAP1L1Q96MZ0 367 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 KLHL8Q9P2G9 620 aaPredicted RBP20.3■□□□□ 0.84
CCM2-214ENST00000481194 POLIQ9UNA4 740 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 SIK3Q9Y2K2 1263 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 ARAP2Q8WZ64 1704 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 GHRP10912 638 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 ATP11AP98196 1134 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 KIF9Q9HAQ2 790 aa20.3■□□□□ 0.84
CCM2-214ENST00000481194 F8W8V4 182 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 AMHP03971 560 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 MMEP08473 750 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 SSTR3P32745 418 aaPredicted RBP20.29■□□□□ 0.84
CCM2-214ENST00000481194 ARL2P36404 184 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms