RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 MKNK2Q9HBH9 465 aa8.82□□□□□ -1
LSM5-210ENST00000480956 INTS10Q9NVR2 710 aaKnown RBP8.82□□□□□ -1
LSM5-210ENST00000480956 KCTD5Q9NXV2 234 aa8.82□□□□□ -1
LSM5-210ENST00000480956 SMG5Q9UPR3 1016 aaKnown RBP8.82□□□□□ -1
LSM5-210ENST00000480956 PSAT1Q9Y617 370 aa8.82□□□□□ -1
LSM5-210ENST00000480956 EPN1Q9Y6I3 576 aaPredicted RBP8.82□□□□□ -1
LSM5-210ENST00000480956 NKRFO15226 690 aaKnown RBP eCLIP8.81□□□□□ -1
LSM5-210ENST00000480956 PRKCBP05771 671 aa8.81□□□□□ -1
LSM5-210ENST00000480956 PCP11498 1178 aaKnown RBP8.81□□□□□ -1
LSM5-210ENST00000480956 RPS2P15880 293 aaKnown RBP8.81□□□□□ -1
LSM5-210ENST00000480956 FGFR4P22455 802 aa8.81□□□□□ -1
LSM5-210ENST00000480956 FGFR3P22607 806 aa8.81□□□□□ -1
LSM5-210ENST00000480956 GABRB3P28472 473 aa8.81□□□□□ -1
LSM5-210ENST00000480956 MRPL28Q13084 256 aaKnown RBP8.81□□□□□ -1
LSM5-210ENST00000480956 NMIQ13287 307 aaPredicted RBP8.81□□□□□ -1
LSM5-210ENST00000480956 ADAM9Q13443 819 aa8.81□□□□□ -1
LSM5-210ENST00000480956 PUM1Q14671 1186 aaKnown RBP eCLIP8.81□□□□□ -1
LSM5-210ENST00000480956 MYBPC3Q14896 1274 aa8.81□□□□□ -1
LSM5-210ENST00000480956 ZNF827Q17R98 1081 aa8.81□□□□□ -1
LSM5-210ENST00000480956 ANKDD1AQ495B1 522 aa8.81□□□□□ -1
LSM5-210ENST00000480956 BMP2KLQ5H9B9 411 aa8.81□□□□□ -1
LSM5-210ENST00000480956 INTS5Q6P9B9 1019 aaKnown RBP8.81□□□□□ -1
LSM5-210ENST00000480956 ATF7IPQ6VMQ6 1270 aa8.81□□□□□ -1
LSM5-210ENST00000480956 ZNF804AQ7Z570 1209 aa8.81□□□□□ -1
LSM5-210ENST00000480956 MIGA1Q8NAN2 632 aa8.81□□□□□ -1
LSM5-210ENST00000480956 ZNF540Q8NDQ6 660 aa8.81□□□□□ -1
LSM5-210ENST00000480956 GTPBP3Q969Y2 492 aaKnown RBP8.81□□□□□ -1
LSM5-210ENST00000480956 EXOC4Q96A65 974 aa8.81□□□□□ -1
LSM5-210ENST00000480956 SAMD11Q96NU1 681 aa8.81□□□□□ -1
LSM5-210ENST00000480956 UIMC1Q96RL1 719 aa8.81□□□□□ -1
LSM5-210ENST00000480956 TWSG1Q9GZX9 223 aa8.81□□□□□ -1
LSM5-210ENST00000480956 ADAM7Q9H2U9 754 aa8.81□□□□□ -1
LSM5-210ENST00000480956 SEMA6BQ9H3T3 888 aa8.81□□□□□ -1
LSM5-210ENST00000480956 TBC1D14Q9P2M4 693 aa8.81□□□□□ -1
LSM5-210ENST00000480956 PRSS50Q9UI38 385 aa8.81□□□□□ -1
LSM5-210ENST00000480956 AP4E1Q9UPM8 1137 aa8.81□□□□□ -1
LSM5-210ENST00000480956 CDY2AQ9Y6F7 541 aa8.81□□□□□ -1
LSM5-210ENST00000480956 STAM2O75886 525 aa8.8□□□□□ -1
LSM5-210ENST00000480956 PRPF6O94906 941 aaKnown RBP8.8□□□□□ -1
LSM5-210ENST00000480956 ANXA1P04083 346 aa8.8□□□□□ -1
LSM5-210ENST00000480956 CLEC3BP05452 202 aa8.8□□□□□ -1
LSM5-210ENST00000480956 GAP43P17677 238 aa8.8□□□□□ -1
LSM5-210ENST00000480956 MAPK3P27361 379 aaPredicted RBP8.8□□□□□ -1
LSM5-210ENST00000480956 EEF1DP29692 281 aaKnown RBP8.8□□□□□ -1
LSM5-210ENST00000480956 THPOP40225 353 aa8.8□□□□□ -1
LSM5-210ENST00000480956 PPP5CP53041 499 aa8.8□□□□□ -1
LSM5-210ENST00000480956 ANKRD1Q15327 319 aa8.8□□□□□ -1
LSM5-210ENST00000480956 WSCD2Q2TBF2 565 aa8.8□□□□□ -1
LSM5-210ENST00000480956 BTNL9Q6UXG8 535 aa8.8□□□□□ -1
LSM5-210ENST00000480956 NLGN4XQ8N0W4 816 aa8.8□□□□□ -1
LSM5-210ENST00000480956 SCAMP5Q8TAC9 235 aa8.8□□□□□ -1
LSM5-210ENST00000480956 BRIX1Q8TDN6 353 aaKnown RBP8.8□□□□□ -1
LSM5-210ENST00000480956 DENND1AQ8TEH3 1009 aa8.8□□□□□ -1
LSM5-210ENST00000480956 SH3RF3Q8TEJ3 882 aaPredicted RBP8.8□□□□□ -1
LSM5-210ENST00000480956 IRF7Q92985 503 aa8.8□□□□□ -1
LSM5-210ENST00000480956 TNFRSF25Q93038 417 aa8.8□□□□□ -1
LSM5-210ENST00000480956 ZNF653Q96CK0 615 aa8.8□□□□□ -1
LSM5-210ENST00000480956 CLPTM1LQ96KA5 538 aa8.8□□□□□ -1
LSM5-210ENST00000480956 RTKNQ9BST9 563 aa8.8□□□□□ -1
LSM5-210ENST00000480956 GREM2Q9H772 168 aa8.8□□□□□ -1
LSM5-210ENST00000480956 MTO1Q9Y2Z2 717 aaKnown RBP8.8□□□□□ -1
LSM5-210ENST00000480956 ATAD2BQ9ULI0 1458 aa8.8□□□□□ -1
LSM5-210ENST00000480956 SCRIBQ14160 1630 aa8.8□□□□□ -1
LSM5-210ENST00000480956 TRIM43BA6NCK2 446 aa8.8□□□□□ -1
LSM5-210ENST00000480956 ERICH4A6NGS2 130 aa8.8□□□□□ -1
LSM5-210ENST00000480956 TAF4O00268 1085 aa8.8□□□□□ -1
LSM5-210ENST00000480956 SGTAO43765 313 aa8.8□□□□□ -1
LSM5-210ENST00000480956 TBX10O75333 385 aa8.8□□□□□ -1
LSM5-210ENST00000480956 BCRP11274 1271 aa8.8□□□□□ -1
LSM5-210ENST00000480956 PSMA4P25789 261 aaKnown RBP8.8□□□□□ -1
LSM5-210ENST00000480956 SDHAP31040 664 aa8.8□□□□□ -1
LSM5-210ENST00000480956 HSPA4P34932 840 aa8.8□□□□□ -1
LSM5-210ENST00000480956 RGS2P41220 211 aa8.8□□□□□ -1
LSM5-210ENST00000480956 HABP4Q5JVS0 413 aaKnown RBP8.8□□□□□ -1
LSM5-210ENST00000480956 PRAMEF14Q5SWL7 426 aa8.8□□□□□ -1
LSM5-210ENST00000480956 ZNF468Q5VIY5 522 aaPredicted RBP8.8□□□□□ -1
LSM5-210ENST00000480956 IRGCQ6NXR0 463 aa8.8□□□□□ -1
LSM5-210ENST00000480956 KDELC1Q6UW63 502 aa8.8□□□□□ -1
LSM5-210ENST00000480956 UNC13DQ70J99 1090 aa8.8□□□□□ -1
LSM5-210ENST00000480956 RHOT1Q8IXI2 618 aa8.8□□□□□ -1
LSM5-210ENST00000480956 LZTR1Q8N653 840 aa8.8□□□□□ -1
LSM5-210ENST00000480956 Q8NFD4 153 aa8.8□□□□□ -1
LSM5-210ENST00000480956 OR6B3Q8NGW1 331 aa8.8□□□□□ -1
LSM5-210ENST00000480956 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
LSM5-210ENST00000480956 KBTBD7Q8WVZ9 684 aa8.8□□□□□ -1
LSM5-210ENST00000480956 TRIM43Q96BQ3 446 aaPredicted RBP8.8□□□□□ -1
LSM5-210ENST00000480956 CABS1Q96KC9 395 aa8.8□□□□□ -1
LSM5-210ENST00000480956 TUBGCP5Q96RT8 1024 aa8.8□□□□□ -1
LSM5-210ENST00000480956 SLX1AQ9BQ83 275 aa8.8□□□□□ -1
LSM5-210ENST00000480956 SLC12A9Q9BXP2 914 aa8.8□□□□□ -1
LSM5-210ENST00000480956 TRIM54Q9BYV2 358 aa8.8□□□□□ -1
LSM5-210ENST00000480956 PIDD1Q9HB75 910 aa8.8□□□□□ -1
LSM5-210ENST00000480956 CYP4F12Q9HCS2 524 aa8.8□□□□□ -1
LSM5-210ENST00000480956 RXFP3Q9NSD7 469 aa8.8□□□□□ -1
LSM5-210ENST00000480956 CPSF2Q9P2I0 782 aaKnown RBP8.8□□□□□ -1
LSM5-210ENST00000480956 CTNNA3Q9UI47 895 aa8.8□□□□□ -1
LSM5-210ENST00000480956 UBA6A0AVT1 1052 aaPredicted RBP8.79□□□□□ -1
LSM5-210ENST00000480956 H7BY64 318 aa8.79□□□□□ -1
LSM5-210ENST00000480956 USP2O75604 605 aaPredicted RBP8.79□□□□□ -1
LSM5-210ENST00000480956 SNRNP70P08621 437 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms