RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 VARS2Q5ST30 1063 aaKnown RBP5.47□□□□□ -1.53
HDAC6-223ENST00000480525 C1orf220Q5T0J3 134 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 FAM171A1Q5VUB5 890 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 ANKRD40Q6AI12 368 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 KIAA1841Q6NSI8 718 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 VSTM1Q6UX27 236 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 SV2AQ7L0J3 742 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 ENOSF1Q7L5Y1 443 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 NELFCDQ8IXH7 590 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 CSGALNACT2Q8N6G5 542 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 FBXL13Q8NEE6 735 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 VN1R2Q8NFZ6 395 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 SPPL2BQ8TCT7 592 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 NELFBQ8WX92 580 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 MYLIPQ8WY64 445 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 SUSD6Q92537 303 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 SAAL1Q96ER3 474 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 SENP8Q96LD8 212 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 KLHL5Q96PQ7 755 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 POP1Q99575 1024 aaKnown RBP5.47□□□□□ -1.53
HDAC6-223ENST00000480525 DUSP9Q99956 384 aaKnown RBP5.47□□□□□ -1.53
HDAC6-223ENST00000480525 CLSTN3Q9BQT9 956 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 PAAF1Q9BRP4 392 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 APOL6Q9BWW8 343 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 BCO2Q9BYV7 579 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 IMPG2Q9BZV3 1241 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 TLE6Q9H808 572 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 UBE2ZQ9H832 354 aaPredicted RBP5.47□□□□□ -1.53
HDAC6-223ENST00000480525 ALG13Q9NP73 1137 aaKnown RBP5.47□□□□□ -1.53
HDAC6-223ENST00000480525 PNPLA8Q9NP80 782 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 ENTPD7Q9NQZ7 604 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 EHD2Q9NZN4 543 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 KLK14Q9P0G3 267 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 TUBGCP4Q9UGJ1 667 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 PRG3Q9Y2Y8 225 aaPredicted RBP5.47□□□□□ -1.53
HDAC6-223ENST00000480525 R3HCC1Q9Y3T6 440 aaKnown RBP5.47□□□□□ -1.53
HDAC6-223ENST00000480525 ASB3Q9Y575 518 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 HCFC2Q9Y5Z7 792 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 UNC80Q8N2C7 3258 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 SPTBN5Q9NRC6 3674 aaKnown RBP5.47□□□□□ -1.53
HDAC6-223ENST00000480525 NCANO14594 1321 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 DOCK6Q96HP0 2047 aa5.47□□□□□ -1.53
HDAC6-223ENST00000480525 HELZP42694 1942 aaKnown RBP5.46□□□□□ -1.53
HDAC6-223ENST00000480525 MYO10Q9HD67 2058 aa5.46□□□□□ -1.53
HDAC6-223ENST00000480525 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CLIC2O15247 247 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 HUS1O60921 280 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CLASP2O75122 1294 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 ZMYND10O75800 440 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CXCL14O95715 111 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 GLP2RO95838 553 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 ITGB3P05106 788 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 HARSP12081 509 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CD44P16070 742 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 IRS1P35568 1242 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 LTBRP36941 435 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 MTHFRP42898 656 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 TUFMP49411 452 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CASP4P49662 377 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CYP2J2P51589 502 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 PMS1P54277 932 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 EPHA5P54756 1037 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 OSTNP61366 133 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 YWHAEP62258 255 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 MRPS5P82675 430 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 TFAMQ00059 246 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 MYL7Q01449 175 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 NCOA4Q13772 614 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CBX2Q14781 532 aaPredicted RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 SMAD2Q15796 467 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CDKAL1Q5VV42 579 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 TDRD10Q5VZ19 366 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 OVOS1Q6IE37 1185 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 ANKRD54Q6NXT1 300 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 FAM171BQ6P995 826 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 SASS6Q6UVJ0 657 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 Q7L0L9 218 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 SPRED2Q7Z698 418 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 GPR149Q86SP6 731 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 METTL23Q86XA0 190 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 FMNL3Q8IVF7 1028 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 DCP1BQ8IZD4 617 aaKnown RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CRYBG2Q8N1P7 616 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 THEM5Q8N1Q8 247 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CCDC150Q8NCX0 1101 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 OR5B17Q8NGF7 314 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 NXPE3Q969Y0 559 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 C18orf25Q96B23 403 aaPredicted RBP5.46□□□□□ -1.54
HDAC6-223ENST00000480525 IQCDQ96DY2 449 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 HPDLQ96IR7 371 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 TNIP3Q96KP6 325 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 PKMYT1Q99640 499 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 FUCA2Q9BTY2 467 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 MTMR12Q9C0I1 747 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 ZCWPW1Q9H0M4 648 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CXCL16Q9H2A7 254 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 ADAM7Q9H2U9 754 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 PCIF1Q9H4Z3 704 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 TMEM51Q9NW97 253 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 COMMD8Q9NX08 183 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms