RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ZNF233A6NK53 670 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 URODP06132 367 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 NFICP08651 508 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 RPL17P18621 184 aaKnown RBP9.8□□□□□ -0.84
VCP-206ENST00000480327 CCNE1P24864 410 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 GUCY2FP51841 1108 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 GRIK3Q13003 919 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 PAK1Q13153 545 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 ADAM9Q13443 819 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 SNRNP35Q16560 246 aaKnown RBP9.8□□□□□ -0.84
VCP-206ENST00000480327 SKOR2Q2VWA4 1001 aaPredicted RBP9.8□□□□□ -0.84
VCP-206ENST00000480327 ZCWPW2Q504Y3 356 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 COBLL1Q53SF7 1204 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 LMBRD2Q68DH5 695 aaPredicted RBP9.8□□□□□ -0.84
VCP-206ENST00000480327 CENPPQ6IPU0 288 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 RBM43Q6ZSC3 357 aaKnown RBP9.8□□□□□ -0.84
VCP-206ENST00000480327 PALB2Q86YC2 1186 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 C12orf56Q8IXR9 622 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 SLC44A3Q8N4M1 653 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 NKD2Q969F2 451 aaPredicted RBP9.8□□□□□ -0.84
VCP-206ENST00000480327 PAAF1Q9BRP4 392 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 PDE11AQ9HCR9 933 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 DLGAP2Q9P1A6 1054 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 CNTN3Q9P232 1028 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 IGSF9Q9P2J2 1179 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 CGNQ9P2M7 1197 aaKnown RBP9.8□□□□□ -0.84
VCP-206ENST00000480327 CEP250Q9BV73 2442 aa9.8□□□□□ -0.84
VCP-206ENST00000480327 SYCE3A1L190 88 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 ANHXE9PGG2 379 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 KIAA0391O15091 583 aaKnown RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 TGM5O43548 720 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 AKAP3O75969 853 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 GLUD1P00367 558 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 ADH1AP07327 375 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 DLATP10515 647 aaKnown RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 GLULP15104 373 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 KCNE1P15382 129 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 IGFBP6P24592 240 aaPredicted RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 RPL13P26373 211 aaKnown RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 GBP2P32456 591 aaPredicted RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 PPP1R2P41236 205 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 TFAMQ00059 246 aaKnown RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 SOX4Q06945 474 aaPredicted RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 HTR4Q13639 388 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 TMEM132DQ14C87 1099 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 NAB2Q15742 525 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 XKR4Q5GH76 650 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 RTP2Q5QGT7 225 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 TTI2Q6NXR4 508 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 FUT10Q6P4F1 479 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 C11orf57Q6ZUT1 292 aaPredicted RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 GLYCTKQ8IVS8 523 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 BRSK2Q8IWQ3 736 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 MLKLQ8NB16 471 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 HASPINQ8TF76 798 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 SMG7Q92540 1137 aaKnown RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 CCDC127Q96BQ5 260 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 PPP1R10Q96QC0 940 aaKnown RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 MED15Q96RN5 788 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 DUSP9Q99956 384 aaKnown RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 RPP25Q9BUL9 199 aaKnown RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 GZF1Q9H116 711 aaPredicted RBP9.79□□□□□ -0.84
VCP-206ENST00000480327 PLEKHA5Q9HAU0 1116 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 KIAA1586Q9HCI6 787 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 DMAC2Q9NW81 257 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 WNT16Q9UBV4 365 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 STK39Q9UEW8 545 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 TUBGCP4Q9UGJ1 667 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 CA14Q9ULX7 337 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 FRMD4BQ9Y2L6 1034 aa9.79□□□□□ -0.84
VCP-206ENST00000480327 BICDL2A1A5D9 508 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 SPDYE4A6NLX3 237 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 CETN3O15182 167 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 ADAM12O43184 909 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 LRRN2O75325 713 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 IL18RAPO95256 599 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 LAMP2P13473 410 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 FKBP3Q00688 224 aaKnown RBP9.78□□□□□ -0.84
VCP-206ENST00000480327 LRRC63Q05C16 580 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 TYRO3Q06418 890 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 CYP24A1Q07973 514 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 TUSC3Q13454 348 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 STX1AQ16623 288 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 EDRF1Q3B7T1 1238 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 POTEHQ6S545 545 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 PRSS55Q6UWB4 352 aaPredicted RBP9.78□□□□□ -0.84
VCP-206ENST00000480327 CYP26C1Q6V0L0 522 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 CREBRFQ8IUR6 639 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 SLC9A9Q8IVB4 645 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 CD302Q8IX05 232 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 FAM186BQ8IYM0 893 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 CSGALNACT2Q8N6G5 542 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 PLEKHO2Q8TD55 490 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 GPR152Q8TDT2 470 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 HDAC7Q8WUI4 952 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 RTP3Q9BQQ7 232 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 PRKD2Q9BZL6 878 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 DNAJC25Q9H1X3 360 aa9.78□□□□□ -0.84
VCP-206ENST00000480327 ASB7Q9H672 318 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms