RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 C8orf34Q49A92 452 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 SEZ6Q53EL9 994 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 N4BP2L1Q5TBK1 243 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 ARL6IP4Q66PJ3 421 aaKnown RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 LONP2Q86WA8 852 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 METTL23Q86XA0 190 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 YAF2Q8IY57 180 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 SYCP3Q8IZU3 236 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 SPEM1Q8N4L4 309 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 FAM160A2Q8N612 972 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 CEP120Q8N960 986 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 DEPDC1BQ8WUY9 529 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 C18orf25Q96B23 403 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 RSPRY1Q96DX4 576 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 AK8Q96MA6 479 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 GCNAQ96QF7 691 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 MSTO1Q9BUK6 570 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 TRPV4Q9HBA0 871 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 ASAH2Q9NR71 780 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 RBM12Q9NTZ6 932 aaKnown RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 C2orf42Q9NWW7 574 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 CEP72Q9P209 647 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 ANGPTL2Q9UKU9 493 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 INSL5Q9Y5Q6 135 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 CHD6Q8TD26 2715 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 HEPACAM2A8MVW5 462 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 ZNF263O14978 683 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 SYN3O14994 580 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 FOXD2O60548 495 aaPredicted RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 IDEP14735 1019 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 LONP1P36776 959 aaKnown RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 SOX9P48436 509 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 LIMK1P53667 647 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 EPHA5P54756 1037 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 SHC2P98077 582 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 YWHAHQ04917 246 aaPredicted RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 SPAG1Q07617 926 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 PLD1Q13393 1074 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 VEPH1Q14D04 833 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 SF3A1Q15459 793 aaKnown RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 XKR4Q5GH76 650 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 TPGS2Q68CL5 300 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 HEATR6Q6AI08 1181 aaKnown RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 TXNDC11Q6PKC3 985 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 ALKAL1Q6UXT8 129 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 ZPBP2Q6X784 338 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 Q6ZS52 159 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 C1orf186Q6ZWK4 172 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 HAUS6Q7Z4H7 955 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 MFSD6LQ8IWD5 586 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 KCTD17Q8N5Z5 321 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 C4orf32Q8N8J7 132 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 SYT2Q8N9I0 419 aaPredicted RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 TTC16Q8NEE8 873 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 BEST2Q8NFU1 509 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 ZSCAN18Q8TBC5 510 aaPredicted RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 SPIRE2Q8WWL2 714 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 DDX1Q92499 740 aaKnown RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 ZBTB45Q96K62 511 aaPredicted RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 ZMAT2Q96NC0 199 aaKnown RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 TBC1D32Q96NH3 1257 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 RXFP3Q9NSD7 469 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 FOXD4L1Q9NU39 408 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 ARHGAP28Q9P2N2 729 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 FBXL5Q9UKA1 691 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 ODF2LQ9ULJ1 636 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 UBQLN1Q9UMX0 589 aaKnown RBP7.69□□□□□ -1.18
COL17A1-205ENST00000480127 TICRRQ7Z2Z1 1910 aa7.69□□□□□ -1.18
COL17A1-205ENST00000480127 SLC38A8A6NNN8 435 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 MAPTP10636 758 aaKnown RBP7.68□□□□□ -1.18
COL17A1-205ENST00000480127 ODC1P11926 461 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 KCNE1P15382 129 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 PLCG1P19174 1290 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 SCP2P22307 547 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 KCNA4P22459 653 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 HOXA6P31267 233 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 EPHB3P54753 998 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 FCHO2Q0JRZ9 810 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 TWF1Q12792 350 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 LRRC32Q14392 662 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 MCM6Q14566 821 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 TMEM132DQ14C87 1099 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 KARSQ15046 597 aaKnown RBP7.68□□□□□ -1.18
COL17A1-205ENST00000480127 SF3A2Q15428 464 aaKnown RBP7.68□□□□□ -1.18
COL17A1-205ENST00000480127 TEAD2Q15562 447 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 ARHGAP15Q53QZ3 475 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 RRAGBQ5VZM2 374 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 ADALQ6DHV7 355 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 IL31Q6EBC2 164 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 OVOS1Q6IE37 1185 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 KCNK18Q7Z418 384 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 WDR5BQ86VZ2 330 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 LEMD2Q8NC56 503 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 TMEM161BQ8NDZ6 487 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 SHKBP1Q8TBC3 707 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 POMGNT1Q8WZA1 660 aa7.68□□□□□ -1.18
COL17A1-205ENST00000480127 LARP4BQ92615 738 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms