RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 NXF1Q9UBU9 619 aaKnown RBP13.15□□□□□ -0.3
USP11-208ENST00000480104 YIPF1Q9Y548 306 aa13.15□□□□□ -0.3
USP11-208ENST00000480104 KNTC1P50748 2209 aa13.15□□□□□ -0.31
USP11-208ENST00000480104 FAM205CA6NFA0 338 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 SYPP08247 313 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 HLA-EP13747 358 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 IL12RB1P42701 662 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 PTENP60484 403 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 CXADRP78310 365 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 MBTD1Q05BQ5 628 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 SPDYCQ5MJ68 293 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 LRCH2Q5VUJ6 765 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 GAREM2Q75VX8 874 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 RIT2Q99578 217 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 TEKT3Q9BXF9 490 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 TRIM4Q9C037 500 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 DHX33Q9H6R0 707 aaKnown RBP13.14□□□□□ -0.31
USP11-208ENST00000480104 AFF4Q9UHB7 1163 aaKnown RBP13.14□□□□□ -0.31
USP11-208ENST00000480104 FBXL5Q9UKA1 691 aa13.14□□□□□ -0.31
USP11-208ENST00000480104 TSC2P49815 1807 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 NUP210Q8TEM1 1887 aaPredicted RBP13.13□□□□□ -0.31
USP11-208ENST00000480104 GOLGA8CPA6NN73 597 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 PLK4O00444 970 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 ADAMTS3O15072 1205 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 TBX3O15119 743 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 RECQL4O94761 1208 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 CYP21A2P08686 494 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 HNRNPLP14866 589 aaKnown RBP eCLIP13.13□□□□□ -0.31
USP11-208ENST00000480104 CLCNKBP51801 687 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 AMPD2Q01433 879 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 SEMG2Q02383 582 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 LY6DQ14210 128 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 C20orf194Q5TEA3 1177 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 RABEPKQ7Z6M1 372 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 DEFB119Q8N690 84 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 RDM1Q8NG50 284 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 WBP1Q96G27 269 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 GLT8D2Q9H1C3 349 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 ATXN3LQ9H3M9 355 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 ANKMY1Q9P2S6 941 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 IL17BQ9UHF5 180 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 TBX20Q9UMR3 447 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
USP11-208ENST00000480104 KIAA1549LQ6ZVL6 1849 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 ANTXRLA6NF34 631 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 E9PAM4 449 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 KRT10P13645 584 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 CIITAP33076 1130 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 GJA4P35212 333 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 SEC13P55735 322 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 EMC2Q15006 297 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 MAP7D1Q3KQU3 841 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 MB21D2Q8IYB1 491 aaPredicted RBP13.12□□□□□ -0.31
USP11-208ENST00000480104 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
USP11-208ENST00000480104 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 USP33Q8TEY7 942 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 SETD7Q8WTS6 366 aaKnown RBP13.12□□□□□ -0.31
USP11-208ENST00000480104 NXPE2Q96DL1 559 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 CEP170P1Q96L14 293 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 TBC1D32Q96NH3 1257 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 PI4K2AQ9BTU6 479 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 IL25Q9H293 177 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 PRDM16Q9HAZ2 1276 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 SRPK3Q9UPE1 567 aa13.12□□□□□ -0.31
USP11-208ENST00000480104 PTPRDP23468 1912 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 E7EWF7 191 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 ASAP2O43150 1006 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 ALDH1A2O94788 518 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 GP1BBP13224 206 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 RFC5P40937 340 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 CYP4F8P98187 520 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 TLE3Q04726 772 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 CRY1Q16526 586 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 CTXN3Q4LDR2 81 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 ARHGAP15Q53QZ3 475 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 GLRA4Q5JXX5 417 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
USP11-208ENST00000480104 BAHD1Q8TBE0 780 aaPredicted RBP13.11□□□□□ -0.31
USP11-208ENST00000480104 CD101Q93033 1021 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 GOLGA2P5Q9HBQ8 144 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 MMP17Q9ULZ9 603 aa13.11□□□□□ -0.31
USP11-208ENST00000480104 ITPR2Q14571 2701 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 H7C4K7 107 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 AP5Z1O43299 807 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 PSMD10O75832 226 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 GABRR2P28476 465 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms