RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 EPHB4P54760 987 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 ITIH3Q06033 890 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 MTMR3Q13615 1198 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 ZNF792Q3KQV3 632 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 EMBQ6PCB8 327 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 CEP128Q6ZU80 1094 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 ENOSF1Q7L5Y1 443 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 TRIM59Q8IWR1 403 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 RUNDC3BQ96NL0 473 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 POP1Q99575 1024 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 FEZ2Q9UHY8 353 aaPredicted RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 SNED1Q8TER0 1413 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 SCN7AQ01118 1682 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 M0QYV0 167 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 SYNCRIPO60506 623 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 HEXIM1O94992 359 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 MOCS2O96007 188 aaPredicted RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 FAM200BP0CF97 657 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 MAPTP10636 758 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 GNL1P36915 607 aaPredicted RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 ZRSR2Q15696 482 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 FBXL13Q8NEE6 735 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 FAM76AQ8TAV0 307 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 HAS1Q92839 578 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 ZBED3Q96IU2 234 aaPredicted RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 MBOAT7Q96N66 472 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 ZIC5Q96T25 663 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 RAD9AQ99638 391 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 SPON2Q9BUD6 331 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 RAB17Q9H0T7 212 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 VIPAS39Q9H9C1 493 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 MRPL47Q9HD33 250 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 SNTG2Q9NY99 539 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 SNX12Q9UMY4 172 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 PCDHA2Q9Y5H9 948 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 CACNA1SQ13698 1873 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 EXTL3O43909 919 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 CEP104O60308 925 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 BAIAP3O94812 1187 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 SCNN1GP51170 649 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 GRIK3Q13003 919 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 NCOA4Q13772 614 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 GPAT2Q6NUI2 795 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 RWDD4Q6NW29 188 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 TMEM270Q6UE05 265 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 MICALCLQ6ZW33 695 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 RHOT2Q8IXI1 618 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 FBXO32Q969P5 355 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 TTC1Q99614 292 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 NT5C1AQ9BXI3 368 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 HSPBP1Q9NZL4 362 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 VPS18Q9P253 973 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 MTRF1LQ9UGC7 380 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 ADAMTS1Q9UHI8 967 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 GTF2IRD1Q9UHL9 959 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 NAGPAQ9UK23 515 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 GIT1Q9Y2X7 761 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 ENC1O14682 589 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 CSF2RAP15509 400 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 ICAM3P32942 547 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 MARSP56192 900 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 IFFO1Q0D2I5 559 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 NAA30Q147X3 362 aaPredicted RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 APTXQ7Z2E3 356 aaKnown RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 IRF2BP1Q8IU81 584 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 CYP2W1Q8TAV3 490 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 DNAJC19Q96DA6 116 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 KIFC3Q9BVG8 833 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 STMN4Q9H169 189 aaPredicted RBP6.31□□□□□ -1.4
CPS1-207ENST00000479988 TBX20Q9UMR3 447 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 PASKQ96RG2 1323 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 RREB1Q92766 1687 aa6.31□□□□□ -1.4
CPS1-207ENST00000479988 MYO1FO00160 1098 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 MEIS2O14770 477 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 MED24O75448 989 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 IRF1P10914 325 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 CKBP12277 381 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 AKAP5P24588 427 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 NPTX2P47972 431 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 RARRES1P49788 294 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
CPS1-207ENST00000479988 PSMD5Q16401 504 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 FBXO47Q5MNV8 452 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 C10orf120Q5SQS8 335 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 TTC25Q96NG3 672 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 SYNDIG1Q9H7V2 258 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 BRD9Q9H8M2 597 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 GPRC5CQ9NQ84 441 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 RAB20Q9NX57 234 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 UTP11Q9Y3A2 253 aaKnown RBP6.3□□□□□ -1.4
CPS1-207ENST00000479988 GOLGA8KD6RF30 607 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 FAM86B1E9PN63 330 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 PRPSAP2O60256 369 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 KIAA0754O94854 1291 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 ITGB3P05106 788 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 FAM86B2P0C5J1 330 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 MYZAPP0CAP1 466 aa6.3□□□□□ -1.4
CPS1-207ENST00000479988 CA4P22748 312 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms