RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 DDX27Q96GQ7 796 aaKnown RBP12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 DNAI2Q9GZS0 605 aa12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 MIOSQ9NXC5 875 aa12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 GDAP2Q9NXN4 497 aa12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 INTUQ9ULD6 942 aa12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 PCDHB7Q9Y5E2 793 aa12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 SNX9Q9Y5X1 595 aa12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 SCN1AP35498 2009 aa12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 SCN5AQ14524 2016 aa12.78□□□□□ -0.36
TM9SF4-206ENST00000479591 KPNA7A9QM74 516 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 PPEF2O14830 753 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 KIAA0355O15063 1070 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 HOXA2O43364 376 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 TIMP1P01033 207 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 PAEPP09466 180 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 FAM163BP0C2L3 166 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 GZMAP12544 262 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 GNA15P30679 374 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 TUSC3Q13454 348 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 PPP1R2P3Q6NXS1 205 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 CNKSR3Q6P9H4 555 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 TRIM72Q6ZMU5 477 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 DPH6Q7L8W6 267 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 TMEM130Q8N3G9 435 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 OLIG1Q8TAK6 271 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 MMS19Q96T76 1030 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 SMYD3Q9H7B4 428 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 GOLGA2P5Q9HBQ8 144 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 RNF19AQ9NV58 838 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 SEPT11Q9NVA2 429 aaKnown RBP12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 MYO1AQ9UBC5 1043 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 LRFN2Q9ULH4 789 aa12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 BARX2Q9UMQ3 279 aaPredicted RBP12.77□□□□□ -0.37
TM9SF4-206ENST00000479591 PODXLO00592 558 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 MED7O43513 233 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 KIF5CO60282 957 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 CILPO75339 1184 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 TACC1O75410 805 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 POMCP01189 267 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 PFKMP08237 780 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 MMEP08473 750 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 H2AFZP0C0S5 128 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 CHRNB2P17787 502 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 IBSPP21815 317 aaPredicted RBP12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 ARHGAP25P42331 645 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 RAP1GAPP47736 663 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 AFF1P51825 1210 aaKnown RBP12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 CDH8P55286 799 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 LILRA4P59901 499 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 FMO1Q01740 532 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 IKBKEQ14164 716 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 NOMO2Q5JPE7 1267 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 TAF3Q5VWG9 929 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 H2AFVQ71UI9 128 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 UBE2Q1Q7Z7E8 422 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 UNC93AQ86WB7 457 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 ABI1Q8IZP0 508 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 TOP6BLQ8N6T0 577 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 TMEM176AQ96HP8 235 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 C16orf45Q96MC5 204 aaPredicted RBP12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 SDCBP2Q9H190 292 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 ACP6Q9NPH0 428 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 LZTFL1Q9NQ48 299 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 RRAGDQ9NQL2 400 aaPredicted RBP12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 KIAA1257Q9ULG3 409 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 INPP5FQ9Y2H2 1132 aa12.76□□□□□ -0.37
TM9SF4-206ENST00000479591 BTNL10A8MVZ5 291 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 THAP12O43422 761 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 HUS1O60921 280 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 RTN2O75298 545 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 TNNT1P13805 278 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 RAG1P15918 1043 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 CLCNKBP51801 687 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 RAD23BP54727 409 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 UPP1Q16831 310 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 CLLU1OSQ5K130 101 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 MICAL3Q7RTP6 2002 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 DEFB128Q7Z7B8 93 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 NPAS4Q8IUM7 802 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 TMEM199Q8N511 208 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 APPL2Q8NEU8 664 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 ZNF606Q8WXB4 792 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 NT5C1AQ9BXI3 368 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 ISCUQ9H1K1 167 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 PDCL3Q9H2J4 239 aa12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
TM9SF4-206ENST00000479591 ABHD14A-ACY1A0A1B0GW23 586 aa12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 ARHGEF37A1IGU5 675 aa12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 ANKRD62A6NC57 917 aa12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 RCCD1A6NED2 376 aa12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 CASTOR2A6NHX0 329 aa12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 SPTLC1O15269 473 aa12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 EFCAB14O75071 495 aa12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 VDRP11473 427 aa12.74□□□□□ -0.37
TM9SF4-206ENST00000479591 EN2P19622 333 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms