RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 XPO7Q9UIA9 1087 aaKnown RBP14.22□□□□□ -0.13
USP42-206ENST00000479544 GTF3C4Q9UKN8 822 aa14.22□□□□□ -0.13
USP42-206ENST00000479544 PRPSAP2O60256 369 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 BANF1O75531 89 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 GRAP2O75791 330 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 SESN2P58004 480 aaPredicted RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 LLGL2Q6P1M3 1020 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 C16orf86Q6ZW13 317 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 NDUFAF2Q8N183 169 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 CCNYL1Q8N7R7 359 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 TMEM35BQ8NCS4 154 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 OLFM3Q96PB7 478 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 SLC4A9Q96Q91 983 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 ETAA1Q9NY74 926 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 MEI4A8MW99 385 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 MGRN1O60291 552 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 GSTA2P09210 222 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 ENO3P13929 434 aaPredicted RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 ETS1P14921 441 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 ACADSP16219 412 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 EIF3EP60228 445 aaKnown RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 PSMC1P62191 440 aaKnown RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 PDCD2Q16342 344 aaPredicted RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 TCP10LQ8TDR4 215 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 ATXN2LQ8WWM7 1075 aaKnown RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 TMEM120AQ9BXJ8 343 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 TRPV6Q9H1D0 765 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 CNOT7Q9UIV1 285 aaKnown RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 TMEM150BA6NC51 233 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 WEE2P0C1S8 567 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 FAM182AQ5T1J6 154 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 TAS1R2Q8TE23 839 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 BCAS3Q9H6U6 928 aa14.21□□□□□ -0.13
USP42-206ENST00000479544 A1CFQ9NQ94 594 aaKnown RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 FBXO6Q9NRD1 293 aaPredicted RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 SAE1Q9UBE0 346 aaPredicted RBP14.21□□□□□ -0.13
USP42-206ENST00000479544 NDUFB10O96000 172 aa14.21□□□□□ -0.14
USP42-206ENST00000479544 ANXA13P27216 316 aa14.21□□□□□ -0.14
USP42-206ENST00000479544 CDH6P55285 790 aa14.21□□□□□ -0.14
USP42-206ENST00000479544 BMPR2Q13873 1038 aa14.21□□□□□ -0.14
USP42-206ENST00000479544 RASA2Q15283 850 aa14.21□□□□□ -0.14
USP42-206ENST00000479544 ARHGAP18Q8N392 663 aa14.21□□□□□ -0.14
USP42-206ENST00000479544 EFCAB3Q8N7B9 438 aa14.21□□□□□ -0.14
USP42-206ENST00000479544 RNF148Q8N7C7 305 aa14.21□□□□□ -0.14
USP42-206ENST00000479544 PEAK1Q9H792 1746 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 TNNC2P02585 160 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 RBP3P10745 1247 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 CYP11B1P15538 503 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 QARSP47897 775 aaKnown RBP14.2□□□□□ -0.14
USP42-206ENST00000479544 MTMR1Q13613 665 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 TTLL12Q14166 644 aaPredicted RBP14.2□□□□□ -0.14
USP42-206ENST00000479544 TFDP1Q14186 410 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 CYP4A22Q5TCH4 519 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 IL31Q6EBC2 164 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 LRRC74BQ6ZQY2 392 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 SLC7A3Q8WY07 619 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 GPBP1L1Q9HC44 474 aaPredicted RBP14.2□□□□□ -0.14
USP42-206ENST00000479544 CYP39A1Q9NYL5 469 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 SEL1LQ9UBV2 794 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 LRCH1Q9Y2L9 728 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 PECAM1P16284 738 aaPredicted RBP14.2□□□□□ -0.14
USP42-206ENST00000479544 HOXA7P31268 230 aaPredicted RBP14.2□□□□□ -0.14
USP42-206ENST00000479544 DLG4P78352 724 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 NFX1Q12986 1120 aaKnown RBP14.2□□□□□ -0.14
USP42-206ENST00000479544 STX3Q13277 289 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 CPNE8Q86YQ8 564 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 CNBD2Q96M20 576 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 PFDN4Q9NQP4 134 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 PLCH1Q4KWH8 1693 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 IGSF9BQ9UPX0 1349 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 C2orf71A6NGG8 1288 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 A6NJR5 290 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 PDE5AO76074 875 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 ATP13A4Q4VNC1 1196 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 LINC00116Q8NCU8 138 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 FAM13CQ8NE31 585 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 HAS1Q92839 578 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 CAMTA1Q9Y6Y1 1673 aa14.2□□□□□ -0.14
USP42-206ENST00000479544 RGPD1P0DJD0 1748 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 ANKRD63C9JTQ0 380 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 APOEP02649 317 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 AQP5P55064 265 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 ZNF200P98182 395 aaPredicted RBP14.19□□□□□ -0.14
USP42-206ENST00000479544 IL1RL1Q01638 556 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 FBXO36Q8NEA4 188 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 HEXIM2Q96MH2 286 aaKnown RBP14.19□□□□□ -0.14
USP42-206ENST00000479544 CLIC5Q9NZA1 410 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 EPS15L1Q9UBC2 864 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 MARF1Q9Y4F3 1742 aaKnown RBP14.19□□□□□ -0.14
USP42-206ENST00000479544 PGM3O95394 542 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 TYK2P29597 1187 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 DSG1Q02413 1049 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 MTFR1Q15390 333 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 SESTD1Q86VW0 696 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 ECHDC2Q86YB7 292 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 PYDC1Q8WXC3 89 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 ZNF75CPQ92670 426 aaPredicted RBP14.19□□□□□ -0.14
USP42-206ENST00000479544 MTMR9Q96QG7 549 aa14.19□□□□□ -0.14
USP42-206ENST00000479544 ZC3H7BQ9UGR2 993 aaKnown RBP14.19□□□□□ -0.14
USP42-206ENST00000479544 A0A0A6YYK5 440 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms