RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 HSPBP1Q9NZL4 362 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 IFNKQ9P0W0 207 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 MAGEC2Q9UBF1 373 aaPredicted RBP7.25□□□□□ -1.25
USP48-208ENST00000479177 STYXL1Q9Y6J8 313 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 CNTNAP2Q9UHC6 1331 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 BRCA2P51587 3418 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 LRRC10BA6NIK2 292 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 LGALS16A8MUM7 142 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 INO80B-WBP1J3KQ70 363 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 ACKR2O00590 384 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 ABLIM1O14639 778 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 B4GALT5O43286 388 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 CBFA2T2O43439 604 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 GNA14O95837 355 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 SERPINC1P01008 464 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 RPLP2P05387 115 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 IQCF3P0C7M6 154 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 EPB41P11171 864 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 DARSP14868 501 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 CDK11BP21127 795 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 EPHA1P21709 976 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 GARTP22102 1010 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 MTIF2P46199 727 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 CASP4P49662 377 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 CYP2J2P51589 502 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 UBASH3AP57075 661 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 NLRP11P59045 1033 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 RAC1P63000 192 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 MRPS6P82932 125 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 CDC42EP1Q00587 391 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 NRG1Q02297 640 aaPredicted RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 TMEM62Q0P6H9 643 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 SETDB1Q15047 1291 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 TRIM71Q2Q1W2 868 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 CCDC40Q4G0X9 1142 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 MIIPQ5JXC2 388 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 TMC7Q7Z402 723 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 RPAINQ86UA6 219 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 TRIM59Q8IWR1 403 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 FAM186BQ8IYM0 893 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 NME8Q8N427 588 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 XXYLT1Q8NBI6 393 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 ANKRD20A12PQ8NF67 263 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 DHX38Q92620 1227 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 BORCS6Q96GS4 357 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 NAP1L5Q96NT1 182 aaPredicted RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 ACO2Q99798 780 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 TUBGCP2Q9BSJ2 902 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 SSBP4Q9BWG4 385 aaPredicted RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 SEZ6LQ9BYH1 1024 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 INO80BQ9C086 356 aaPredicted RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 HAPLN2Q9GZV7 340 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 PCIF1Q9H4Z3 704 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 STARD7Q9NQZ5 370 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 TRMT13Q9NUP7 481 aaKnown RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 PRMT7Q9NVM4 692 aaPredicted RBP7.24□□□□□ -1.25
USP48-208ENST00000479177 ANKFY1Q9P2R3 1169 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 RALGAPA2Q2PPJ7 1873 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 TANC1Q9C0D5 1861 aa7.24□□□□□ -1.25
USP48-208ENST00000479177 A0A0B4J269 797 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 METTL12A8MUP2 240 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 ARVCFO00192 962 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 PDE2AO00408 941 aaPredicted RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 KIAA0391O15091 583 aaKnown RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 MAPK13O15264 365 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 TSPAN1O60635 241 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 EXOC3O60645 756 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 TOM1L1O75674 476 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 ADRB2P07550 413 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 PROZP22891 400 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 PSMC2P35998 433 aaKnown RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 PBX1P40424 430 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 CRYBB1P53674 252 aaPredicted RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 MCL1Q07820 350 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 MGAT3Q09327 533 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 CCDC173Q0VFZ6 552 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 PRPF4BQ13523 1007 aaKnown RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 NOLC1Q14978 699 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP48-208ENST00000479177 SNX17Q15036 470 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 PCBP1Q15365 356 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP48-208ENST00000479177 PTGISQ16647 500 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 MAN2A1Q16706 1144 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 ATF7IP2Q5U623 682 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 EEF1DP3Q658K8 133 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 SLFN12LQ6IEE8 588 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 MPZL3Q6UWV2 235 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 TSHZ1Q6ZSZ6 1077 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 FRMD5Q7Z6J6 570 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 RSPH3Q86UC2 560 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 VSTM4Q8IW00 320 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 GALNT11Q8NCW6 608 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 ZSWIM2Q8NEG5 633 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 U2AF1L4Q8WU68 220 aaKnown RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 TMEM40Q8WWA1 233 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 POMGNT1Q8WZA1 660 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 ANP32BQ92688 251 aaKnown RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 PMEPA1Q969W9 287 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 SAAL1Q96ER3 474 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 ZBTB45Q96K62 511 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms