RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 RNF187Q5TA31 235 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 WWC2Q6AWC2 1192 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 MTHFD1LQ6UB35 978 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 ABHD15Q6UXT9 468 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 REXO1Q8N1G1 1221 aaKnown RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 BHLHE22Q8NFJ8 381 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 NEK9Q8TD19 979 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 ATP8B4Q8TF62 1192 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 DNAJB3Q8WWF6 145 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 RIT2Q99578 217 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 CDCA3Q99618 268 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 ZNF577Q9BSK1 485 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 INO80BQ9C086 356 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 OSBPL2Q9H1P3 480 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 ELAC1Q9H777 363 aaKnown RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 CERS4Q9HA82 394 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 AGO4Q9HCK5 861 aaKnown RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 ZNF302Q9NR11 478 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 POLR3KQ9Y2Y1 108 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 PCDHB7Q9Y5E2 793 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 PCDHB12Q9Y5F1 795 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 SCN5AQ14524 2016 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 ADGRA3Q8IWK6 1321 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 KAT6AQ92794 2004 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 SIP14410 1827 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.07□□□□□ -1.28
HOXB3-209ENST00000478644 hCG_1642624A0A1W2PR95 340 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 RBAK-RBAKDNI3L0D1 243 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 STXBP3O00186 592 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 RFXAPO00287 272 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 RPS6KA5O75582 802 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 MMP1P03956 469 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 ZSCAN20P17040 1043 aaPredicted RBP7.07□□□□□ -1.28
HOXB3-209ENST00000478644 DNAJA1P31689 397 aaKnown RBP7.07□□□□□ -1.28
HOXB3-209ENST00000478644 SARSP49591 514 aaKnown RBP7.07□□□□□ -1.28
HOXB3-209ENST00000478644 DNM2P50570 870 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 JAK3P52333 1124 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 SP4Q02446 784 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 LPIN1Q14693 890 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 PLCB4Q15147 1175 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 TCEAL1Q15170 157 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 KCNMB1Q16558 191 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 TMEM31Q5JXX7 168 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 MARCH8Q5T0T0 291 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 FYB2Q5VWT5 728 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 MOXD1Q6UVY6 613 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 SLC24A5Q71RS6 500 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 PLA2G4DQ86XP0 818 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 FAM13CQ8NE31 585 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 RNF141Q8WVD5 230 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 ALPK1Q96QP1 1244 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 MAP7D2Q96T17 732 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 C17orf80Q9BSJ5 609 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 LRRC3Q9BY71 257 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 ACBD3Q9H3P7 528 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 RGS18Q9NS28 235 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.07□□□□□ -1.28
HOXB3-209ENST00000478644 MAGEC2Q9UBF1 373 aaPredicted RBP7.07□□□□□ -1.28
HOXB3-209ENST00000478644 PUF60Q9UHX1 559 aaKnown RBP7.07□□□□□ -1.28
HOXB3-209ENST00000478644 NAP1L2Q9ULW6 460 aaPredicted RBP7.07□□□□□ -1.28
HOXB3-209ENST00000478644 LZTS1Q9Y250 596 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 CDY2AQ9Y6F7 541 aa7.07□□□□□ -1.28
HOXB3-209ENST00000478644 SPTBN5Q9NRC6 3674 aaKnown RBP7.06□□□□□ -1.28
HOXB3-209ENST00000478644 DENND3A2RUS2 1198 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 LCHNA4D1U4 455 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 EPOPA6NHQ4 379 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 CPLX1O14810 134 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 GREM1O60565 184 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 PFKFB2O60825 505 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 DEXIO95424 95 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 GLI1P08151 1106 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 GHRP10912 638 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 HSD3B2P26439 372 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 KLRC1P26715 233 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 CTNNB1P35222 781 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 FAM189BP81408 668 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 TFF2Q03403 129 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 ARID5AQ03989 594 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 KRT17Q04695 432 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 GIT2Q14161 759 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 PCBP1Q15365 356 aaKnown RBP eCLIP7.06□□□□□ -1.28
HOXB3-209ENST00000478644 UBE2SQ16763 222 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 ZNF648Q5T619 568 aaPredicted RBP7.06□□□□□ -1.28
HOXB3-209ENST00000478644 REC114Q7Z4M0 266 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 JAZF1Q86VZ6 243 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 FAM178BQ8IXR5 827 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 CKAP2LQ8IYA6 745 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 DTWD2Q8NBA8 298 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 GOLM1Q8NBJ4 401 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 GDPD5Q8WTR4 605 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 CRYGNQ8WXF5 182 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 WASF1Q92558 559 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 FAM122AQ96E09 287 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 PRRX2Q99811 253 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 TRIT1Q9H3H1 467 aaKnown RBP7.06□□□□□ -1.28
HOXB3-209ENST00000478644 CHST12Q9NRB3 414 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 TMEM161AQ9NX61 479 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 DACT1Q9NYF0 836 aa7.06□□□□□ -1.28
HOXB3-209ENST00000478644 REV1Q9UBZ9 1251 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms