RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 VPS13AQ96RL7 3174 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 PTPRZ1P23471 2315 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-216ENST00000478603 KANSL1LA0AUZ9 987 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 TULP1O00294 542 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-216ENST00000478603 MICAL2O94851 1124 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 GCNT3O95395 438 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 CD72P21854 359 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 CDR1P51861 262 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 PFKPQ01813 784 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 GRM2Q14416 872 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 L1TD1Q5T7N2 865 aaKnown RBP24.71■■□□□ 1.55
C9orf3-216ENST00000478603 EFCAB13Q8IY85 973 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 TTC9BQ8N6N2 239 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 PDILTQ8N807 584 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 ATAD1Q8NBU5 361 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 ELSPBP1Q96BH3 223 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 ASB16Q96NS5 453 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 DDX23Q9BUQ8 820 aaKnown RBP24.71■■□□□ 1.55
C9orf3-216ENST00000478603 FGFBP2Q9BYJ0 223 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 DPP3Q9NY33 737 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 SLC27A5Q9Y2P5 690 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 C2CD2Q9Y426 696 aa24.71■■□□□ 1.55
C9orf3-216ENST00000478603 MTF2Q9Y483 593 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-216ENST00000478603 MORC2Q9Y6X9 1032 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-216ENST00000478603 MTMR11A4FU01 709 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 NASPP49321 788 aaPredicted RBP24.7■■□□□ 1.54
C9orf3-216ENST00000478603 EPHA5P54756 1037 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 PRKCQQ04759 706 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 MYBPC2Q14324 1141 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 UBXN2BQ14CS0 331 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 CENPPQ6IPU0 288 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 OR10T2Q8NGX3 314 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 NKD2Q969F2 451 aaPredicted RBP24.7■■□□□ 1.54
C9orf3-216ENST00000478603 SAAL1Q96ER3 474 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 ACCSQ96QU6 501 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 DNAJC25Q9H1X3 360 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 ZFP14Q9HCL3 533 aa24.7■■□□□ 1.54
C9orf3-216ENST00000478603 RIF1Q5UIP0 2472 aaKnown RBP24.7■■□□□ 1.54
C9orf3-216ENST00000478603 SOAT2O75908 522 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 WNT7BP56706 349 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 POSTNQ15063 836 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 STK38Q15208 465 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 TEAD2Q15562 447 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 SHKBP1Q8TBC3 707 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 FAM213AQ9BRX8 229 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 LRRC3Q9BY71 257 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 HEBP1Q9NRV9 189 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 PANK4Q9NVE7 773 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 TFIP11Q9UBB9 837 aaKnown RBP24.69■■□□□ 1.54
C9orf3-216ENST00000478603 EXOC7Q9UPT5 735 aa24.69■■□□□ 1.54
C9orf3-216ENST00000478603 FAM186AA6NE01 2351 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 CYP11A1P05108 521 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 TAF6P49848 677 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 EPHB3P54753 998 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 ARMCX5Q6P1M9 558 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 TPRG1Q6ZUI0 275 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 TMC8Q8IU68 726 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 LEMD2Q8NC56 503 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 LINC00301Q8NCQ3 95 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 PYM1Q9BRP8 204 aaKnown RBP24.68■■□□□ 1.54
C9orf3-216ENST00000478603 OLFML3Q9NRN5 406 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 TICRRQ7Z2Z1 1910 aa24.68■■□□□ 1.54
C9orf3-216ENST00000478603 FRMD3A2A2Y4 597 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 FAM170BA6NMN3 283 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 CYB561D2O14569 222 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 IL18RAPO95256 599 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 PAX3P23760 479 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 VIPR2P41587 438 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 ALDH1A3P47895 512 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 POU5F1Q01860 360 aaKnown RBP24.67■■□□□ 1.54
C9orf3-216ENST00000478603 PLD1Q13393 1074 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 FOXD4L5Q5VV16 416 aaPredicted RBP24.67■■□□□ 1.54
C9orf3-216ENST00000478603 C1orf210Q8IVY1 113 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 SYCP3Q8IZU3 236 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 ZSCAN18Q8TBC5 510 aaPredicted RBP24.67■■□□□ 1.54
C9orf3-216ENST00000478603 FOXD4L4Q8WXT5 416 aaPredicted RBP24.67■■□□□ 1.54
C9orf3-216ENST00000478603 SMARCD2Q92925 531 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 LTB4R2Q9NPC1 389 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 PCDHB13Q9Y5F0 798 aa24.67■■□□□ 1.54
C9orf3-216ENST00000478603 DMDP11532 3685 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 NCANO14594 1321 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 PATJQ8NI35 1801 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 A0A1W2PRU2 124 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 GOLGA8IPA6NC78 632 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 GOLGA8JA6NMD2 632 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 PRPF6O94906 941 aaKnown RBP24.66■■□□□ 1.54
C9orf3-216ENST00000478603 SLC39A12Q504Y0 691 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 WSCD1Q658N2 575 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 VITQ6UXI7 678 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 BORCS6Q96GS4 357 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 FAM84AQ96KN4 292 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 SLITRK6Q9H5Y7 841 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 BRD9Q9H8M2 597 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 ZNF334Q9HCZ1 680 aaPredicted RBP24.66■■□□□ 1.54
C9orf3-216ENST00000478603 R4GN57 208 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 COL4A2P08572 1712 aa24.66■■□□□ 1.54
C9orf3-216ENST00000478603 CFAP54Q96N23 3096 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 SPTLC2O15270 562 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 TARSP26639 723 aaKnown RBP24.65■■□□□ 1.54
C9orf3-216ENST00000478603 TFAMQ00059 246 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms